KEGG   Spiractinospora alimapuensis: J4H86_22615
Entry
J4H86_22615       CDS       T07850                                 
Name
(GenBank) CRISPR-associated endonuclease Cas3''
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
saiu  Spiractinospora alimapuensis
Brite
KEGG Orthology (KO) [BR:saiu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:saiu02048]
    J4H86_22615
Enzymes [BR:saiu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J4H86_22615
Prokaryotic defense system [BR:saiu02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    J4H86_22615
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 Helicase_C Cas3_C DEAD MIPOL1_N HD
Other DBs
NCBI-ProteinID: QVQ51551
LinkDB
Position
4840242..4843103
AA seq 953 aa
MGLTSPDLRHKGKERGLKGAHYPALCHGADVAAVAIVVWRRFVAPGLRATIAGAMGVTER
EAERIIAFWAALHDVGKVEPHMQRKLKARLPSSYPAPAGKPVPHDRVGCLWLTVALVEAG
YPSPTSDDPLTHLVAQMLGGHHGRYTAQVSSRGDLRTTIDLPEDIWDEQRFAYLAAMRDL
LGDPPRPPALDPTTAVLVTGIVVLSDWLASQEHFILERVPASLDDFDLRTHFEGVLRRAP
SLLTEAGLDRLRTPPASFAETFPDISIPHALQQSIATHLPRLVTDTPGLLIVTAPTGEGK
TEVGLFASDHMGEACGRPGRTFLLPTMATANSMHTRVRDFVRRRADAPAPLMKLHSMAWL
DQEFLPASPRPDSAILSSDEFDAALAPTQWLYGGLRALLASWGIGTFDQALLGILPTRHN
AVRLFGLAGGSVVVDEAHAVDPYMRLEMEQLLRWFGRFGVPVVLLSATLHRSVADAYARA
YLEGQEAKLPRSLPGRRGKKSGREPVVGHLNYPGWVCVTTEDNTPVVTHNPEPITVTERP
ALTVTTTFVPLREHPSPYGNKTDHELDRVAALGEQLAPVFTSGGCAAVICTTVAEAQATY
ELVKQLRQDVGASTTELRLLHARFPQRQRDRITEELVYRLGRDGAKDRPASMVLVATAII
EQSLDIDVDHMITDLAPLALLLQRAGRCWRHEAWRVADKDVPVFTRGPFTEPRVSVLTPE
EFVDKEELPGAWRAIHGTSLLVRTTNLLREHGEKVRIPEDVQDLVEQVYDADRIRARDEA
EYERMAKETAERQQGEEAIVPTPAALDYGADLLRMNNGTLSDEAVTTRLGADSVRVVCCF
RDPDGTLWADPEATQLLPGAEPERTRPLTRDEAATVMSLSIPVRGGKWQTRLSDADLTVP
TPWQNRPQLERVLLLPHPVTEPGHPTPASLGGRSWFLDPELGLRVDVPERQRH
NT seq 2862 nt   +upstreamnt  +downstreamnt
gtgggtctcacttcccctgacctgcgccacaagggaaaagaacgcggcctgaagggtgcg
cactatccggccctctgccatggtgcggacgtcgccgcggtggcgatcgtggtgtggcgg
cgtttcgtcgctcccgggttacgcgccaccatcgccggggcgatgggggtgacggaacgc
gaggccgagaggatcatcgcgttctgggccgcgctacatgatgtcgggaaggtcgagccg
cacatgcagcgcaagctgaaggcgcggctcccgtccagctatccggctccagccggaaaa
cccgtcccgcacgacagggtcggctgtctctggctgacggtagcgctggtcgaggccggg
tacccgtcgccgacctccgatgacccgctgactcacctggtcgcgcagatgctgggcggc
catcacgggcgatataccgcacaggtctcttctcgcggtgatctgcgtaccaccatcgac
ctgcccgaggacatctgggacgagcaacggttcgcctacctggccgccatgcgcgacctc
ctaggcgacccaccgcgtccgccggcactcgacccgacgaccgcagtgctcgtcaccggc
attgtcgtgctgtccgactggctggcgagccaggagcacttcatcctggagcgcgtcccc
gcctcactcgacgacttcgacctgcggacccacttcgaaggagttctgcggcgagccccc
agtcttctgaccgaggcgggactggaccgccttcgtactccgccggcgagcttcgcggag
acgttcccggacatctccatcccccacgccttgcagcagtccatcgccacgcacctgcca
aggctcgtcacagacacgccgggcttgttgatcgtcaccgcccccaccggtgaaggcaag
accgaggtcgggctcttcgcctctgaccacatgggggaggcgtgcggtcgccccggacgc
accttcctcctgccgaccatggccaccgcgaacagcatgcacactcgggtgcgggacttc
gtgaggcggcgcgccgacgcccctgccccgttgatgaaactgcactcgatggcgtggctc
gaccaggagtttcttccggcgtctcccagacccgactccgccatcctcagcagcgacgag
ttcgacgctgccctggcgcccacccagtggctctatgggggactccgggcgctcctggcc
tcctggggtatcggaacgttcgaccaggccctgctcggaatcctccccacccggcacaac
gcggtgcggctgttcggcctggccgggggatccgtggtcgtcgacgaggcgcacgccgtt
gacccttacatgcggttggagatggagcagctcctgcgctggttcggccggttcggcgtc
ccggtcgtgttgctgtccgcgacgctgcaccgttccgttgcggatgcctacgcacgggcc
tacctcgagggccaagaggcgaaactgccacgctcgctgccggggcggcggggaaagaag
tcgggtcgcgaacccgtggtgggccacctcaactatcccggctgggtgtgcgtcaccaca
gaggacaacactccggtggtgacgcacaaccccgaaccgatcaccgtcactgaacgaccg
gcactcaccgtcaccaccacattcgtcccgctccgcgagcaccccagcccctacggcaac
aagaccgaccacgaactcgatcgcgtcgccgcactcggtgagcagctcgccccggtgttc
acgtccgggggctgtgccgcggtgatctgcacgaccgtggcggaagcgcaagccacctac
gagctcgtgaagcaacttcgccaagacgtgggcgcgagtaccaccgagctgcggctgcta
cacgcacggtttccgcaacggcagcgggaccgcatcacagaggaattggtctaccgcctg
ggccgtgatggagcaaaggatcggcccgcatcgatggttctggtggcgacggcgatcatc
gaacagtctctcgatatcgatgtcgaccacatgattactgacctcgccccgctcgcgctg
ctcctccagcgggcggggcggtgttggcggcatgaggcctggcgtgtggccgacaaggac
gtgccggtgttcacccgtggcccctttaccgagcctcgggtcagtgtgctcacacctgag
gaattcgtggacaaggaagagctccccggtgcatggcgcgccattcacggtacgtcgctg
ctggtccgaaccaccaatctgctacgcgaacacggggagaaggtccgaatccccgaggac
gtccaggatctggtggaacaggtctacgacgccgatcgcatccgggcgagggacgaggcg
gagtatgagcgtatggccaaggagacggctgagcgtcagcagggagaggaagcgatcgtg
cccacgccggccgccctggactatggtgctgacctgctgcgtatgaacaacggaacgctc
tccgacgaggcggtcaccacccgcctcggtgccgactcggtccgcgtcgtgtgctgcttc
cgagaccccgatgggacgctgtgggcggacccagaggccacccagctcctccctggagcc
gagcccgaacgcacccgccccctcacccgcgacgaggccgcgaccgtgatgagcctcagc
attccggtgcgcggcggcaaatggcagacgcggctcagcgacgcggacctgacagttccc
accccgtggcagaaccgcccgcaactcgaacgcgtactcctcctcccccatcccgtgacc
gaacccggccatcccacccccgcctccctcggcggaaggtcctggtttctcgaccctgag
ctggggctcagggtcgatgttcccgagcgtcaacgacactga

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