Spiractinospora alimapuensis: J4H86_23325
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Entry
J4H86_23325 CDS
T07850
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
saiu
Spiractinospora alimapuensis
Pathway
saiu02024
Quorum sensing
saiu03060
Protein export
saiu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
saiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
J4H86_23325 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
J4H86_23325 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J4H86_23325 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
saiu02044
]
J4H86_23325 (ffh)
Enzymes [BR:
saiu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
J4H86_23325 (ffh)
Secretion system [BR:
saiu02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
J4H86_23325 (ffh)
Eukaryotic Sec-SRP protein
J4H86_23325 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
MMR_HSR1
Zeta_toxin
nSTAND3
ArsA_ATPase
AAA
AAA_18
cobW
APS_kinase
AAA_30
AAA_31
AAA_16
AAA_33
TsaE
NPHP3_N
AAA_24
Thymidylate_kin
AAA_5
SLFN-g3_helicase
ABC_tran
AAA_17
NACHT
KAP_NTPase
6PF2K
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QVQ51673
LinkDB
All DBs
Position
5009165..5010763
Genome browser
AA seq
532 aa
AA seq
DB search
MFETLSDRLASVFTSLRGKGRLSEEDINSTAREIRLALLEADVALPVVRAFIARVKERAR
GAEVSKALNPAQQVIKIVNEELVEILGGETREIRYAKTPPTVIMLAGLQGAGKTTLAGKL
AKWLSQQRNTPLLVAADLQRPNAVTQLQVVGERAGVPVYAPEPGNGVGDPVSVARDSIEQ
AKRQNHNVVIIDTAGRLGVDEEMMRQAADIRDAVSPDEILFVVDAMIGQDAVNTAEAFLE
GVGYDAVALTKLDGDARGGAALSIRHVTGRPIMFAATGEKLEDFDLFHPDRMASRILDMG
DVLTLIEQAQRTFDEDEAERMAGKFTSGEQLTLEDFLEQMQMVRRLGPIGNLLGMMPGMG
QMRDQVANIDDKDLDRITAIIRSMTPDERADPKMLNGSRRARIAKGSGTEVSDVSGLVTR
FFEAQKALKAMQSGGGIPGMPGMPGIPGMGGGRKKAAKAEKKKKGRQRSGNPAKAKQDEA
ARAAERERRKEEGAKPDALPPGLGGGGNPKLPPGLGGGAGMPDLSGLKFPKD
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgagacgctttctgaccgactcgcatcggtgttcacctcgctgcgcggcaaaggt
cgcctgtcggaggaggacatcaattccaccgcacgcgagatccgcctcgcgctgttggaa
gcagacgtcgcactcccggtcgtgcgtgccttcatcgcgcgcgtcaaggaacgggcgcgt
ggcgccgaggtttccaaggcgctgaaccccgcgcagcaggtcatcaagatcgtcaacgag
gaactggtggagatcctcggcggcgagacccgggagatccgctacgccaagactccgccc
acggtcatcatgctggccggcttgcagggtgcgggtaagaccaccctcgccggaaagctc
gccaagtggctttcgcagcagcgcaacaccccgcttctggtggcggcggacctgcagcgc
cccaacgccgtgacccagttgcaggtcgtcggtgagcgtgctggtgtccccgtctacgcg
ccggagccgggcaacggtgtgggggaccccgtctcggtggcgcgggattccatcgagcag
gccaagaggcagaaccacaacgtcgtcatcatcgacaccgccggccggttgggtgtcgat
gaggagatgatgcgccaggcggccgacatccgcgacgccgtcagccctgacgagatcctg
ttcgtggtcgacgccatgatcggccaggacgccgtcaacaccgccgaggccttcctcgag
ggtgtgggctacgacgcggtcgccctcaccaagctggacggcgacgcgcgtggtggtgcc
gcgctgtcgatccgccacgtcaccgggcgtccaatcatgttcgcggccacgggcgagaaa
ctcgaggacttcgacctcttccacccggaccggatggcgtcgcgcatcctcgacatgggt
gacgtcctcaccctgatcgaacaggcgcagcgcacgttcgacgaggacgaggccgagcgg
atggccgggaagttcacctcgggtgagcagctcaccctcgaggacttcctggagcagatg
cagatggtgcgtcggctcggtccgatcggcaacctgctcgggatgatgcccggcatgggg
cagatgcgggatcaagtcgccaacatcgacgacaaggatctggaccggatcaccgccatc
atccgttcgatgacgccggacgagcgcgcggacccgaagatgctgaacgggtcccggcgc
gcgcgtatcgccaagggttccggcaccgaggtcagcgatgtcagcggcctggtgacccgg
ttcttcgaggcacagaaggcgctgaaggccatgcagtccggcggcggcatccccggtatg
ccgggcatgccggggatcccgggtatgggaggtggccggaagaaggccgccaaggcggaa
aagaagaagaagggccgccagcgcagcggaaaccccgccaaggccaagcaggacgaggcc
gcgcgggcagcggaacgcgagcgtcgcaaggaagagggcgccaagcccgacgctcttccg
ccgggcctcgggggcggcggcaaccccaaactcccgccgggcctcggcggcggcgcgggg
atgcccgacctgtccggcctgaagttccccaaggactga
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