Spiractinospora alimapuensis: J4H86_25720
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Entry
J4H86_25720 CDS
T07850
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
saiu
Spiractinospora alimapuensis
Pathway
saiu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
saiu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
J4H86_25720
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
saiu01007
]
J4H86_25720
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saiu03016
]
J4H86_25720
Enzymes [BR:
saiu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
J4H86_25720
Amino acid related enzymes [BR:
saiu01007
]
Aminoacyl-tRNA synthetase
Class II (U)
J4H86_25720
Transfer RNA biogenesis [BR:
saiu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
J4H86_25720
Prokaryotic type
J4H86_25720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
QVQ52073
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All DBs
Position
5565988..5568486
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AA seq
832 aa
AA seq
DB search
MRVPVSWLRDYVDIPESTTGRDLAAALTLAGLEVETVEDTAAGIDGSLVVGTVLAIEELT
GFKKPIRYCQVDVGDANGTGEPQNVICGAVNFAVGDNVIVVLPGSTLPGGFAVGARKTYG
RMSEGMICSAKELGMWEEHAGILVLGDAAPAPGTDAVRYLELDDEVLDIAVTPDRGYALS
LRGVAREVAVLYGLDFRDPAELVVDASEEDSYPAEVEAPEACSHYVLRAVRDFDPDAESP
LWMKHRLAKGGVRPISLAVDVTNYVMLELGQPLHAWDRRALKGPLRVRLGHAGETLETLD
HVTRSLDTDDILICDDTGPVNIAGVMGGLTTEIGPTSTDVVIEAAHFEAAHIGRTSRRHK
LSSESSRRFERGVDNAVQEVAATRAVRLLADLGGAVLEPGMTVVDNTSPPATISVAESHA
AAVSGVDYAPGTSQRRLRQIGCTVEELGEELRVTPPSWRPDLTDVNDFAEEVVRLEGYDL
IPSVPPRAPAGRGLTPSQRLRRGVGRTLAESGLVEVLNYPFIGERDFDALQLPATDERRR
ANRLANPLSEDEPLLRTTLLPGLFTTVTRNVGRGFPDVALFELGLVYRPRAGQPSVAPVL
PVDRGPSAAELESIAAALPDQPRMVGAVLTGDLQPAGWWGEGRPAIWADAIAVARQVARI
ANVDLRAVAASYEPWHPGRCAALYATLPDGAEVLVGHAGELHPRTVSAFGLPERTVAMEL
NLDLVERARQTVSPPRVSSFPVATQDIALVVDAGTPAGDVARTLREGAGNLLEDLRLFDV
FSGEQVGEGKKSLAYTLRFRAADRTLTGEEVAVARDAAVAAATERFGAALRS
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttccagtgtcctggcttcgggactacgtggacatcccggagagcacgacgggc
cgcgacctggccgccgccctcaccctcgcgggactggaggtcgagacggtcgaggacacc
gccgccgggatcgacggatccctcgtcgtgggcacggtgctggccatcgaggaactgacc
ggcttcaagaagccgatccggtactgccaggtggacgtcggcgacgccaacggtacgggt
gaaccccagaacgtcatctgcggcgccgtcaacttcgcggtcggcgacaacgtgatcgtc
gtgctccccggatccaccctgcccggcggattcgccgtcggcgcccgcaagacctacggc
cgcatgtccgagggcatgatctgttccgcgaaggaactgggcatgtgggaggaacacgcc
ggcatcctcgtgctcggggacgccgcgcccgcacccgggaccgacgcggtgcgctacctc
gaactcgacgacgaggtactggacatcgcggtgacgcccgaccgcgggtacgccctgtca
ctgcgtggcgtggcccgcgaggtcgccgtcctctacggtctcgacttccgtgacccggcg
gagctggtggtggacgcctcggaggaggatagctaccccgccgaggtggaggcccccgag
gcctgctcccattacgtgttgcgcgccgtccgtgatttcgaccccgacgccgagtcgccg
ctgtggatgaaacaccgactggccaagggcggggttcggcccatctcgctggcggtggac
gtcacgaactacgtcatgttggagctcgggcagccgctgcacgcgtgggaccgccgcgcg
ctcaagggcccgctccgggtgcgcctgggacatgcgggggagaccctggaaaccctggac
cacgtcacccggtccctggacaccgacgacatcctgatctgtgacgacaccgggccggtg
aacatcgccggcgtcatgggcggactgaccaccgagatcgggccgacctccaccgacgtc
gtgatcgaggccgcgcacttcgaggccgcccacatcggccgcacctcccgccgccacaag
ctcagctcggagtcctcccgacggttcgagcgcggtgtggacaacgccgtgcaggaggtg
gccgcgacccgcgcggtgcgactcctcgccgacctcggtggagcggtgctggagcccggg
atgacggtcgtggacaacacgtcgccccccgccacgatctcggtggccgagagccacgcc
gccgccgtgtcgggagttgactacgctcccgggacctcccagcggcggttgcgccagatc
gggtgcaccgtggaggaacttggcgaggagttgcgggtcacgccgcccagttggcggcca
gacctcaccgacgtcaacgacttcgccgaggaggtcgtgcggctcgagggctacgacctg
atcccctccgtcccgccgcgcgcaccggcgggtcgtggcctcaccccttcccagcgcctc
cggcgtggcgtcggtcggaccttggcggagtccggcttggtggaggtcctgaactatccc
ttcatcggggaacgcgacttcgacgcgctgcagttgccggcgaccgacgagcgtcgccgc
gccaaccgcctcgccaacccgctcagcgaggacgagccgctgctgcgtaccactctgctg
ccgggcctgttcacgaccgtgacgcgcaacgtcggtcgaggcttccccgacgtggcgctg
ttcgagctgggcctggtgtaccgcccgcgcgccggacagccctccgtggcgccggtcctt
ccggtggaccgggggccttcggcggcggaactggagtcgatcgccgcggcgctgcccgac
cagcctcgaatggtgggcgccgtgctgacgggtgacctccaacccgccggctggtggggt
gaggggcggccggcgatctgggccgacgcgatcgcggtcgcacgacaggtggcgcgaatc
gcgaacgtggacctacgggccgtcgccgcgagctacgaaccgtggcaccccgggcgctgc
gccgcgctctacgcgacacttcccgacggtgcggaggtgctcgtggggcacgccggggag
ttgcacccccggacggtgagcgccttcggtctccccgagcgtacggtcgccatggaactc
aacctcgacctcgtggagcgggcccgccagacggtgagtccacctcgcgtgtcgtccttc
ccggtcgccacgcaggacatcgctctcgtcgtcgacgcgggcaccccggcgggggacgtc
gcacgtacgctgcgcgagggcgctgggaatcttctcgaggatctgcggctcttcgacgtg
ttcagtggggaacaggtcggcgagggcaagaagtccctcgcctacaccctgcgtttccgc
gccgccgaccggaccctgaccggtgaggaggtcgccgtggcccgcgacgccgccgtcgcg
gcggcgaccgagcgcttcggggcggcactgcggtcctga
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