Salinicola sp. JS01: QO259_00340
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Entry
QO259_00340 CDS
T09138
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sajs
Salinicola sp. JS01
Brite
KEGG Orthology (KO) [BR:
sajs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sajs03400
]
QO259_00340 (phrB)
Enzymes [BR:
sajs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
QO259_00340 (phrB)
DNA repair and recombination proteins [BR:
sajs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
QO259_00340 (phrB)
Prokaryotic type
QO259_00340 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WIX33152
UniProt:
A0A9Y2D7S2
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All DBs
Position
complement(58858..60273)
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AA seq
471 aa
AA seq
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MSDLQLVWFRNDLRTLDNTALSAAAQRGPVIGVFLASRDQWRRHQHGANKIEFIHRGVRA
LSDALDALNIPLLYRDIGDFSQAPKVLEEIVREHDIATLHFNREYPLDERQRDAAVSERL
HQAGIVVHDYTDHIAFEPGELLTGQGDYYKVFTPFAKAWHQRVTAEQLALRETPTRQRAL
SLTRNAIPALPEADRSAVVDAHTWVAGQDAAADKLERFLDARARRYATDRDFPALAGTSE
LSAYLATGMISHRQCLQAVMANNGGHLADGDAGLKSWTSELIWREFYQHVAVGFPYICLH
QPFQTHTAKLKWRHSDADFEAWCEGRTGFPLVDAAMRQLVATGWMHNRLRMLTAMFLSKH
LLLDWRRGEAFFMAHLVDGDFASNNGGWQWAASTGTDAAPYFRIFNPITQSQRFDPEGEF
IAHWVPELAELPVKSRHQPSANERRDTGYPQAIVDHKRARQRALDAFKELD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctgcagctggtgtggttccgtaacgatctgcgcaccctggacaacaccgcg
ctgagcgccgccgcccagcgcggcccggtgatcggtgtgtttctcgccagccgtgatcag
tggcgccgccaccagcacggcgccaacaagatcgaattcatccatcgcggtgtgcgcgcc
ctgagcgacgccctggatgcgctcaatatcccgctgctataccgtgatatcggcgacttc
tcccaggcgcccaaggtgctcgaagagatcgtgcgtgaacacgatattgccaccctgcac
ttcaatcgcgaataccccctagacgagcgccagcgcgacgctgccgtgagcgagcgctta
catcaggccggtatcgtggtccacgactacaccgaccatatcgccttcgagccgggtgag
ctgctgaccggccagggcgactactacaaggtgttcacgccgttcgccaaggcctggcat
caacgggtcaccgccgaacagctggccctgcgcgagaccccaacgcgccagcgcgcgctc
tcgctgacccgcaacgccatcccggcactccccgaggcggaccgctccgccgtggtcgat
gcgcatacctgggtcgccgggcaggacgccgcggcggacaagctggagcgatttctcgac
gcgcgtgctcgccgctacgccaccgaccgcgactttcccgccctcgccggcaccagtgag
ctctcggcctacctcgccaccggcatgatctcgcatcgccagtgcctgcaggcagtgatg
gccaacaatggcggccatctggccgacggcgacgccggtctcaagagctggacaagcgaa
ctgatctggcgcgagttctaccagcacgtggcggtgggcttcccctacatctgcctgcat
cagccgttccagacccataccgccaagctcaagtggcgccacagcgacgccgacttcgag
gcatggtgcgagggcaggaccggtttcccgctggtcgacgctgcgatgcgtcagctagtg
gccaccggctggatgcacaaccgtctgcgcatgctcacggcgatgttcctgagcaagcat
ctgctgctcgactggcgccgcggcgaggcgttcttcatggcgcacttggtcgacggcgac
ttcgcctccaacaacggcggctggcagtgggcggcctccaccggcaccgacgccgcgccc
tatttccgcatcttcaacccgatcacccagtcccagcgtttcgatccggagggcgagttc
atcgcccactgggtgccggagctggccgagttgccggtcaagtcgcgccaccagcccagc
gccaacgagcgccgcgataccggctatccccaggccatcgtcgatcacaagcgtgcccgc
cagcgcgccctggacgcgttcaaggagctcgactga
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