Salinicola sp. JS01: QO259_05115
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Entry
QO259_05115 CDS
T09138
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sajs
Salinicola sp. JS01
Brite
KEGG Orthology (KO) [BR:
sajs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sajs03400
]
QO259_05115
DNA repair and recombination proteins [BR:
sajs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QO259_05115
Archaeal homologous recombinant proteins
QO259_05115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WIX34984
LinkDB
All DBs
Position
complement(1139628..1140869)
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AA seq
413 aa
AA seq
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MVKLFHTADWHLGQSFHGQERHVEQRAFLDWLLATLAERQPDALLIAGDIFDVVNPSLRA
QELLYDFIVAAHAALPALEIVMIAGNHDSGSRIELPAPLMKRLKTHALGRVHWLKDGSLD
SDHLLVPLPDAAGEIRAWCLALPFLRPAEVTGGDVDDYREGIARVHRELVEAAEARREPG
QALVAMSHAHLQGAAVSEASERPIVIGGEEAISAALFPPSIAYVALGHLHRPQQVGEPRI
RYSGSPLPLDFSESHYPHQVLEVTLNGAELDTVESLPIPRHVALERVGPDSVEAVEAELL
AWQPEPTTGEALPRERWPWLEVRVALDTPQPDLRARIEAAIADKPLRLLRIHSHYPNAGK
DPAEHVAVDLDSLTPQEIFARRWQAEYGETPPEAVARDFATLVQEVQDAEGEA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atcgtgaaacttttccacactgccgactggcatctgggccagtccttccatggccaggag
cgccatgtcgaacagcgcgcctttctcgactggctgctggcgacgctcgccgagcgccag
cccgatgcgctgctgatcgccggtgacatcttcgatgtggtcaacccctcgctgcgggcc
caggagctgctctacgacttcatcgtcgccgcccacgccgccctgccggcgctggagatc
gtgatgatcgccggcaatcacgacagcggttcgcgcatcgaactgccggcgccgctgatg
aagcggctcaagacccatgccctggggcgggtgcactggctcaaggatggcagcctcgac
agcgatcacctgctggtaccgctgcccgacgccgcgggggagattcgcgcctggtgcctg
gcgctgcccttcctgcgcccggcggaggtcaccggcggcgatgtcgacgactaccgcgag
ggcatcgcccgcgtccaccgcgagctggtagaagccgccgaagcccgccgtgaaccgggc
caggcgctggtggcgatgagccacgcccatctgcagggcgccgccgtctccgaagccagc
gagcggccgatcgtgatcggcggcgaggaggcgatctccgccgcgctctttccgccctcg
atcgcctatgtggcgctgggtcacctgcaccgaccgcagcaggtgggcgagccgcgcatc
cgctacagcggttcgccgctgccgctcgacttcagcgagagccactacccccaccaggta
ctcgaagtgaccttgaacggggccgaactcgacaccgtcgagagcctgccgataccccgc
cacgtggccctcgagagggtcggcccggatagcgtcgaggcggtcgaggccgagcttttg
gcgtggcagcccgaacccaccaccggggaggcgctaccgcgcgagcgctggccgtggctg
gaggtacgcgtggcgctcgacacgccgcagcccgatctgcgcgcccggatcgaagcggcg
atcgccgacaagccgctgcggctcttgcgcattcacagccactatcccaatgccgggaaa
gaccccgcagagcacgtcgcagtcgatctcgacagcctcaccccgcaggagatcttcgcc
cgccgctggcaggcggagtatggcgagacgccgccggaagcagtggcaagggatttcgcc
accctggtgcaggaagtccaggacgcggagggtgaggcatga
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