KEGG   Salinicola sp. JS01: QO259_05930
Entry
QO259_05930       CDS       T09138                                 
Name
(GenBank) type VI secretion protein IcmF/TssM N-terminal domain-containing protein
  KO
K11891  type VI secretion system protein ImpL
Organism
sajs  Salinicola sp. JS01
Pathway
sajs03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sajs00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    QO259_05930
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sajs02044]
    QO259_05930
Secretion system [BR:sajs02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   QO259_05930
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF4131 DUF6611 Vpu
Other DBs
NCBI-ProteinID: WIX34202
LinkDB
Position
1298537..1302532
AA seq 1331 aa
MRFLRFLRALKGFWPLSIVLWLVGLALCVLLLPLVTQERELIFIAMALVTALWLLVVVMR
QYHRIRAERNIENLVELEVHREAAESEPGDYQVLSERLKHAMAMQRAARSVDGGKASLYE
LPWYLVVGMAASGKTSLLTRSSLSATMAGGSNLSAVSGTQHCDWYFSREAVMIDTAGRYL
VEDRPASEFADFLKTLRKQRRKPAINGLVLVVSLPELLEQSRQDAHALAEQLVSRVSEYR
ACLGINPPVYLFFSKADLLPGFTRTFEALDATERQQPWGLTFSLDELRRQGVTRAFQQRF
PGLVATLRARVDARVVEEGSDADSELLRFPDYFAELYGVLSDFLEQFDTQQNAERAPILR
GLYFTSALQSGPALPALIDEQTRDAFALAPTSATAAAPRNGERSYFITDTFRRVVFPDRN
LSLYYSQRGDRRSLPPFMIGAVGALGVAAIAAQGWSAYNNKQWLEHIRERIAPLGTDASL
QPAQRRALRDDLEQQLTAIERHRETGVPLRLDLGLYQGDALRAPLKEAWATLFTRDVLTP
LSWRLARQLRSLAAFGDSADGIDTGNGEGGTAADASAQAGTHADAAGAARDQGRQIGEDA
MARMRERSTSRPTLGSVPTSASEIGSRARSELRSRTTDSARDAWYSARSSAETSLEEGLR
DRTSQLGSAVGDADGDESTLTLSGEQGPSLSEEMLTKLSQADVEQLIESYSSLKLYLILT
DPDAHADQGDFVASALPRLWADYVARRGLDTSRDSIMDNAALYVHYLQEGKAPALERDDK
LVADSRDRLNAFLIDSSLVDREYLRYQLEVEQRFEPLTLSRMAPDMEGRLFYSSRAVPAF
YTREVWNQYLRPAIIETVSGDLQRESDWVLDDENVDDAVQSKARFVSQLMARYKRDYAIA
WERFLDNTHVADFETLDQASVRLSQLSDLQGSPLRQVLEAVKANTTWDDPKAQTEDDASG
KAKDQSFWGRVMSVFNGAGGASAVDINTLPRLNDGLLTRHFRPVTRLLAADDATGSDNSV
LNQYLLDLRQLKVRVDNVRSAQDVGRSSKSLIMATLSGQPTEINTLRNFVASRVDTSRTP
LIRALEPLFREPVEDTWKALNAPARQQLNAAWDDKIVTPWDQMIAGRYPVSDSVNEASVR
DMEYFIDPDKGVMSQFRKEEIGDLAGSGSGQRSTMVDPRMLSSIDDATALGRVIDSLSDL
QNGFELQINPTAGLTDIILTIDGQRLHYRNNTQSWERLTWPGNGETFGARLDIVNRNGQR
HTVFDYPNRWGFLRMIESARITPIDKARQRFSWNTYMGTASFDVRNFGGVKISDLERIKS
LRIPQMSGSGQ
NT seq 3996 nt   +upstreamnt  +downstreamnt
atgcgttttcttcgattcctgcgcgcgctcaaaggcttctggccgctctcgatcgtcctc
tggctggtggggctggcgctgtgcgtgctgctgctgccgctggtgacccaggagcgcgag
ctcatcttcatcgccatggcgctggtcaccgcgctgtggctgctggtcgtggtgatgcgc
cagtaccaccgcatccgcgccgagcgcaacatcgagaatctggtcgagctcgaggtacac
cgcgaggccgccgagagcgagcccggcgactatcaggtgctgagcgagcggctcaagcac
gccatggcgatgcagcgggcggcgcgctcggtggatggcggcaaggcctcgctctacgag
ctgccgtggtatctggtggtgggtatggcggcctcgggcaagacctcgctgctgacccgc
tcctcgctctcggcgaccatggccgggggcagcaatctctccgcggtgagcggcacccag
cactgcgattggtacttcagccgcgaggcggtgatgatcgataccgccggccgctatctg
gtcgaggatcggccggcgagcgagttcgccgacttcctcaagaccctgcgcaagcagcgg
cgcaagccggcgatcaacggtctggtgctggtggtcagcctgcccgagctgctcgaacag
tcgcgacaggacgcccacgcgctggccgagcagctggtcagccgggtgagcgagtaccgc
gcctgcctgggcatcaatccgccggtctatctgttcttcagcaaggcggacctgctgccc
ggcttcacccgtaccttcgaagcgctcgacgccacggagcgccagcagccctggggcctg
accttctcgctcgacgagctgcgtcgccagggcgtgacccgggccttccagcagcgcttc
ccggggctggtggccacgctgcgcgcacgggtcgacgcccgcgtggtggaagagggcagc
gatgccgacagcgagcttttacgcttccccgactacttcgccgaactctacggtgtgctc
agcgacttcctcgagcagttcgatacccagcagaacgccgagcgcgcaccgatcctgcgc
gggctctacttcaccagcgcgctgcagagcggcccggcgctgccggcgctgatcgacgag
cagacccgcgacgccttcgccctggcgccgacgtcggcgaccgcagcggcgccgcgcaac
ggtgagcgtagctacttcatcaccgataccttccgtcgggtggttttccccgaccgcaac
ctgagcctctactactcccagcgcggtgaccgccgctcgctgccgccgttcatgatcggc
gcggtcggtgcgctcggggttgcggcgatcgccgcccagggctggtcggcctacaacaac
aagcagtggctcgaacatatccgcgagcgcatcgcgcctctcggtacggatgccagcctc
cagccggcgcagcgccgggcgctgcgcgacgacttggagcagcagttgacagcgatcgag
cgtcaccgcgagaccggcgtgccgctgcgtctcgacctgggcctgtatcagggcgatgcg
ctgcgcgcgccgctgaaggaagcctgggccacgctgttcacgcgtgacgtgctgacgccg
ctctcctggcgtctggcgcggcagctgcgttcgctggccgccttcggtgattcggccgac
ggtatcgataccggtaacggcgaaggcggaacggccgccgacgcgtcggcgcaggcaggt
acgcatgcggatgccgccggcgcggcgcgggaccagggccgccagatcggcgaagacgcc
atggcgcgcatgcgcgagcgctcgacctcgcggccgaccctgggcagcgtacccaccagc
gcctccgagatcggcagtcgcgcgcgcagtgagctgcgttcacgcaccaccgacagcgcc
cgtgatgcctggtactcggcgcgcagcagcgccgaaacctcgctggaagaggggctgcgt
gatcgtaccagccaactgggcagcgccgtgggcgatgccgatggcgacgagtccacgctc
acgctgtccggcgagcagggcccctcgctctccgaggagatgctgaccaagctctctcag
gcggacgtcgagcagctgatcgagagctactcctcgctcaagctctatctgattctgacc
gacccggacgcccatgcggatcagggcgacttcgtcgcctcggcgctgccgcgactgtgg
gccgactacgtggcgcgccgcggactggatacctcccgcgacagcatcatggacaacgcc
gcgctctacgtgcactacctgcaggagggcaaggcgccggcgcttgagcgcgacgacaag
ctggtcgccgacagccgcgaccggctcaacgccttcctgatcgattcgagcctggtcgac
cgcgaatacctgcgctaccagctggaggtagagcagcgcttcgaaccgctgacgctgtcg
cgcatggcccccgacatggaaggccggctgttctactccagccgtgcggtaccggctttt
tatacccgcgaggtgtggaaccagtacctgcgtccggcgatcatcgagaccgtctccggc
gatctccagcgggaatcggactgggtgctcgacgacgagaacgtcgacgatgcggtgcag
tcgaaggcgcgcttcgtcagtcagctgatggcgcgctacaagcgtgactacgccatcgcc
tgggagcgtttcctcgacaacacccacgtcgccgacttcgagaccctggaccaggccagc
gtgcgcctatcccagctcagcgacctgcagggctcgccgctgcgccaggtgctggaagcg
gtcaaggccaacaccacctgggacgaccccaaggcgcagaccgaggacgatgccagcggc
aaggccaaggaccagagcttctggggccgggtgatgagcgtgttcaacggcgcgggaggt
gcctctgcggtcgatatcaacacgctgccgcgcctcaacgatggcctgttgacccggcac
ttccgcccggtgacgcgactgctggcggcggacgatgccaccggcagcgacaactcggtg
ctcaatcagtacctgctcgacctgcgccagctcaaggtgcgcgtggacaacgtgcgcagc
gcccaagacgtgggccgcagcagcaagtcgctgatcatggcgacgctctccggccagccg
accgagatcaacaccctgcgcaacttcgtcgcctcgcgcgtggatacctcgcgcacgccg
ctgatccgggcgctcgaaccgctgttccgcgagccggtcgaggacacctggaaggcgctc
aacgccccggcgcgccagcagctcaacgccgcctgggacgacaagatcgtcacgccgtgg
gaccagatgattgccgggcgctatccggtcagcgactcggtcaacgaagcctcggtgcgc
gacatggagtacttcatcgatcccgacaagggggtgatgtcgcagttccgcaaggaggag
atcggcgatctggcgggttccggcagtggccagcgctcgaccatggtcgacccgcgcatg
ctctcgagcatcgacgacgccaccgccctcggccgggtcatcgacagcctgtctgacctg
cagaacggcttcgagctgcagatcaaccccaccgcggggctgaccgatatcatcctgacc
atcgacggccagcggctgcactaccgtaacaacacccagtcgtgggagcggctgacctgg
ccgggcaacggcgaaacctttggcgcgcgtctggatatcgtcaatcgcaacggccagcgc
catacggtgttcgactatcccaaccgctggggcttcctgcgcatgatcgagagtgcccgg
atcaccccgatcgacaaggcgcgccaacggttcagctggaacacctacatgggcacggcc
agcttcgatgtgcgcaacttcggtggggtgaagatctcggatctcgaacggatcaagtcg
ctgcgcattccgcagatgagcgggtccggacagtga

DBGET integrated database retrieval system