KEGG   Salinicola sp. JS01: QO259_07625
Entry
QO259_07625       CDS       T09138                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
sajs  Salinicola sp. JS01
Pathway
sajs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sajs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QO259_07625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sajs03019]
    QO259_07625
Enzymes [BR:sajs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     QO259_07625
Messenger RNA biogenesis [BR:sajs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     QO259_07625
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 Utp25_C
Other DBs
NCBI-ProteinID: WIX34507
UniProt: A0A9Y2DG29
LinkDB
Position
1686043..1687332
AA seq 429 aa
MSESDNTQAPAQNRRPKRRRRKPRKSQSRNANGWSLDQFPVAPVAGRWRFHDFDLPLALM
RAIHAEGFEYCTPIQAEALMHTLLGGDVVGKAQTGTGKTAAFLISMLAYFLEEEAPDGQK
PGTPRALVVAPTRELALQIEKDAKALARFTTLNVASVVGGMDYQKQREQLGKNLDILVAT
PGRLLDFQQKRDIDLSQVEVLVLDEADRMLSMGFIPDVKRIIRYTPKREERQTFLFSATF
TPDILNLSEQWTHNPAHVEIEVTTENAANIDQRVYLVSDSDKRRLLINLLKQESMERVIV
FGNRRDLVRELDGLLREAGINVAMLSGDVPQNQRISTLEKFREGEIQVLVATDVAGRGIH
IEDVSHVVNYTLPEDPEDYVHRIGRTGRAGAKGVSISFVGEEDAFSLPEIEAYIKDKLPC
EQPPESMLV
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgagtgagtcggacaacacccaggcaccggcacagaaccgcagacccaagcggcgtcga
cgcaagcctcgtaaatcgcagtcgcgcaacgccaacggctggtcgctggatcagtttccg
gtcgcgcccgtggccggccgctggcggttccacgatttcgatctgccgctggcgctgatg
cgcgccatccacgccgaggggttcgagtactgcaccccgatccaggccgaagcgctgatg
cacacgctgctaggcggcgacgtggtgggcaaggcgcagaccggtaccggcaagacggcc
gcgtttctgatctcgatgctcgcctatttcctcgaggaggaggcgccggacggccagaag
ccggggacgccgcgggcactggtcgtcgcccccacccgcgagctggcgctgcagatcgag
aaggacgccaaggcgctggcgcgcttcaccacgctcaacgtggccagcgtggtcggtggc
atggattaccagaagcagcgcgagcagttgggcaagaacctggacatcctggtggccacg
ccgggccggctgctggacttccagcagaagcgcgacatcgatctctcccaggtcgaggtg
ctggtgctcgatgaagcggatcgcatgctgtcgatgggtttcatccccgacgtcaagcgc
atcatccgctacacgcccaagcgtgaagagcgccagaccttcctgttctcggcgaccttt
accccggatattctcaacctgtccgagcagtggacccacaatccggcccacgtcgagatc
gaggtgaccaccgagaacgccgccaacatcgatcagcgcgtctatctggtcagcgacagt
gacaagcgccggctgctgatcaacctgctcaagcaggagtcgatggagcgcgtgatcgtc
ttcggcaaccgccgcgatctggtgcgtgagctcgatggactgctgcgcgaggcgggcatc
aacgtagcgatgctctccggcgacgtgccgcagaatcagcgtatcagcacgctcgagaag
ttccgcgagggtgagatccaggtgctggtggcgaccgatgtcgccgggcgcggcattcat
atcgaggatgtcagccacgtggtcaactacaccctgcccgaggacccggaagactacgtg
caccgtatcggtcgtaccggtcgcgccggcgccaagggggtctcgatcagtttcgtcggc
gaggaggacgcgttctcgctgcccgagatcgaggcttatatcaaggacaagctgccgtgc
gagcagccgccggagtcgatgctcgtctga

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