Salinicola sp. JS01: QO259_08100
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Entry
QO259_08100 CDS
T09138
Symbol
ihfA
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
sajs
Salinicola sp. JS01
Brite
KEGG Orthology (KO) [BR:
sajs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sajs03032
]
QO259_08100 (ihfA)
03036 Chromosome and associated proteins [BR:
sajs03036
]
QO259_08100 (ihfA)
03400 DNA repair and recombination proteins [BR:
sajs03400
]
QO259_08100 (ihfA)
DNA replication proteins [BR:
sajs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QO259_08100 (ihfA)
Chromosome and associated proteins [BR:
sajs03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
QO259_08100 (ihfA)
DNA repair and recombination proteins [BR:
sajs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
QO259_08100 (ihfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
YtxC
Motif
Other DBs
NCBI-ProteinID:
WIX34598
UniProt:
A0A9Y2DDM3
LinkDB
All DBs
Position
1801415..1801723
Genome browser
AA seq
102 aa
AA seq
DB search
MGALTKAELAEHLHTELGFSKREAKYMVETFFEEIRGCLRENEQVKLSGFGNFDLRDKRE
RPGRNPKTGEEIPISARRVVTFRPGQKLKAKVESFDGELQDP
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgctgaccaaggctgaactcgccgagcacctgcatacggagctcggcttctcc
aagcgggaagccaagtacatggtggagacgttcttcgaggagattcgtggctgcctacgc
gaaaacgagcaggtgaagctgtcggggttcggcaacttcgatctgcgcgacaagcgcgag
cggccggggcgcaacccgaagacgggcgaggagataccgatctccgcccggcgcgtggtc
acctttcgacccgggcagaagctgaaggccaaggtcgaaagcttcgacggcgagctgcag
gacccctga
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