Salinicola sp. JS01: QO259_08225
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Entry
QO259_08225 CDS
T09138
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
sajs
Salinicola sp. JS01
Pathway
sajs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sajs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QO259_08225 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sajs03400
]
QO259_08225 (uvrB)
DNA repair and recombination proteins [BR:
sajs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QO259_08225 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QO259_08225 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_22
UB2H
AAA_30
DUF87
Motif
Other DBs
NCBI-ProteinID:
WIX34622
LinkDB
All DBs
Position
1826768..1828798
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AA seq
676 aa
AA seq
DB search
MNKPFKIHSKYRPAGDQPAAIEGLVRGLGAGLSHQTLLGVTGSGKTFTVANVVETLQRPT
IVLAPNKTLAAQLYGEFKSFFPDNAIEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPEQYMKMRLHFNRGEQIDQRQFLRRLAELQ
YTRNDADFRRGTYRVRGDVIDIFPADAEDEGVRVELFDDEIDSIRLFDPLTGEVRGQVPR
MTIYPKTHYVTPRDTILSAVDAIKQELAERLDYLRKHERLVEAQRLEQRTLYDIEMMLEL
GYCNGIENYSRYLSGREPGQAPPTFFDYLPDDALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMQFEEWENILPQTVFVSATPGPYEQSHAGQVVEQVVRPTGLVDP
QIEVRPASTQVDDLLSEIRLRLEVEERVLVTTLTKRMAEDLTEYLDEHDVRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGR
AARNANGKAILYGDRVTDSMRRAIDETERRRAKQIAHNEEHGIVPRTVTKSVADIMEGAQ
APGRKGGRKRAEQRVAEAPGSYTRDELSAMSAPQLTKEIGKLEDRMFEAAQNLEFEQAAK
LRDQLQTLKARLLELG
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacccttcaagattcactccaagtaccgccccgcgggtgaccagccggccgcc
atcgaggggctggtacgtgggctcggggcggggctgtcgcaccagacgctgctcggggtc
accgggtcgggcaagaccttcaccgtcgccaacgtagtcgagacactgcagcgtccgacc
atcgtgctggcgcccaacaagaccttggcggcgcagctctacggtgagttcaagagcttc
ttccccgacaacgccatcgagtacttcgtctcctactacgactactatcagccggaagcc
tatgtgccgtcgtcggacaccttcatcgagaaggatgcctcgatcaacgaccatatcgag
cagatgcggctatcggcgaccaaggcgctgctcgagcgtcgcgacgcgctgatcgtggtc
tcggtgtcggcgatctacggtctgggcgatcccgagcagtacatgaagatgcggctgcac
ttcaaccgcggcgagcagatcgaccagcgccagttcctgcgccgcctcgccgagctgcag
tacacgcgtaacgacgccgactttcgccggggtacctaccgcgtgcgcggcgatgtgatc
gatatctttccggcggacgccgaggacgagggcgtgcgggtggagctgttcgacgacgag
atcgactcgatccggctgttcgacccgctcaccggcgaggtgcgcggccaggtgccgcgc
atgaccatctaccccaagacccactacgtcaccccgcgcgacaccattctctcggccgtg
gatgcgatcaagcaggagctggccgagcggctcgactatctgcgtaagcacgagcggctg
gtcgaagcgcagcggctcgagcagcgcaccctctacgacatcgagatgatgctcgaactg
ggctactgcaacggtatcgagaactactcgcgctatctttccggtcgagagccggggcag
gcgccgccgaccttcttcgactatctgcccgacgatgcgctgctgttcatcgacgaatcc
cacgtcagcgtgccccaggtgggcggcatgtacaaaggcgaccgttcgcgcaaggagacc
ctggtggagtacggtttccgcctgccctcggcgctcgacaaccgtccgatgcagttcgag
gagtgggagaacatcctgccgcagacggttttcgtctcggctacgcccggcccctacgag
cagtcccatgccgggcaggtggtggagcaggtggtacgtcccaccgggctggtcgacccg
cagatcgaggtgcgcccggcgtcgacccaggtcgacgatctgctctccgagatccgcctg
cgcctcgaagtcgaggagcgggtgctggtgaccacgctgaccaagcgcatggccgaggat
ctcaccgagtacctcgacgagcacgatgttcgcgtgcgctatctccactcggacatcgac
accgtggagcgggtcgagatcatccgcgatctgcgcctgggcaagttcgacgtgctggtg
gggatcaacctgctgcgtgagggcctggatatccccgaggtgtcgctggtggcaatcctg
gatgccgacaaggagggtttcctgcgcgccgagcgctcgctgatccagaccatcggccgc
gccgcacgtaacgccaacggcaaggcgatcctctacggtgaccgggtcaccgactcgatg
cgccgggcgatcgacgagaccgagcgtcgccgcgccaagcagattgcccacaacgaggag
cacggcatcgttccgcgtacggtgaccaagtcggtcgccgatatcatggaaggggcccag
gcgccggggcgcaagggtggccgcaagcgtgccgaacagcgcgtcgccgaagcgcctggc
agctatacccgcgacgaactgagtgcgatgagcgcgccgcagctgaccaaggagatcggc
aagctcgaggatcgcatgttcgaggcggcgcagaacctggagttcgagcaggccgccaag
ctgcgcgatcagttgcagacgctcaaggcgcgtctgctcgagctgggttga
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