Salinicola sp. JS01: QO259_11575
Help
Entry
QO259_11575 CDS
T09138
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
sajs
Salinicola sp. JS01
Brite
KEGG Orthology (KO) [BR:
sajs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sajs03016
]
QO259_11575
Enzymes [BR:
sajs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
QO259_11575
Transfer RNA biogenesis [BR:
sajs03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QO259_11575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
WIX31461
UniProt:
A0A9Y2D3I3
LinkDB
All DBs
Position
2516857..2518797
Genome browser
AA seq
646 aa
AA seq
DB search
MLQNNALLAQLKQNIRAQTPRAQGTIKATDKGFGFLETEDGTSYFIPPPAMKQVLHGDRI
EAAIKEDGDKKQAEPEKLIEASLDRFIARVQLREGRLAVIPDHPSINQPLKARIKRSLDE
ASIADGDWVVARLVRHPLRADDRGFFTQIDELVVKRDDPAVPWRVTLARHALEQECPPAA
DSWPLQEEGLEREDLTAEPFFTIDGEKTRDMDDALRVETSDDGWTLTVAIADPTAYVDET
HPADQEARTRAFTVYLPGQNVTMLPEALADDLCSLKPDVERPVLACRLQVGRDGTLGEYR
FFAATIRSQARLVYDDVSDWLEGVDNAETPAAAVAPQLEALRDLAQARSAWREQNTLVFK
DRPDYVFDLDDAGNVLAIRTETRRTGQRMIEEAMIVANACCADLLSREVGHGIFNVHHAF
EPEKLDPALEFLAAQGIEVEREQLSELPRYRELRRALDSREDAWLDARLRRFQGYTNMSA
RPGPHFGLGLPAYATWTSPIRKYGDMVNHRLIKRVLKGEAAPAEASQRLTEQLTERRRLN
RMAERDVKDWLYVRYLGQFLDQGTVYDADIIDIRRGGMRVRLSANGATAFIPAPMLHSDR
NQVAIDDKEGRIQIAGEPRYQLGGTLRVKLVEAREATRSLVATPAE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaacaacgctcttctggcccagctgaagcaaaacatccgcgcccagaccccg
cgtgcccagggcacgatcaaagccaccgacaagggcttcggtttcctcgagaccgaggac
gggacctcctacttcattcccccgcccgccatgaagcaggttctgcacggcgaccgtatc
gaggccgcgatcaaggaggatggcgacaagaagcaggccgaaccggagaagctgatcgaa
gcctctctcgatcgcttcatcgcccgcgtgcagctgcgcgagggccgcctggcggtaatc
cccgaccatccctcgatcaaccagccgctcaaggcgcgcatcaagcgctccctcgacgag
gccagcatcgccgacggcgactgggtcgtggcacgtctggtgcgccatccgctgcgtgcc
gacgaccgcggctttttcacccagatcgacgagctggtggtcaagcgcgacgaccctgcc
gtgccgtggcgggtgaccctggcgcgccatgcgctggagcaggagtgcccgccggcggcg
gattcctggccgctgcaggaagagggtctcgagcgcgaagacctcaccgccgagccgttc
ttcaccatcgacggtgagaagacccgcgacatggacgacgccctgcgcgtcgagaccagc
gacgacggctggaccctgaccgtcgccatcgccgaccccaccgcctatgtcgacgagacc
cacccggccgatcaggaagcgcgcacccgcgccttcaccgtctacctgccgggtcagaac
gtgaccatgctgccggaggcgctggccgacgatctgtgctcgctcaagcccgacgtcgag
cgtccggtgctcgcctgccgcctgcaggtgggacgcgacggcaccctcggcgaatatcgc
ttcttcgccgcgaccatccgctcccaggcgcggctggtctacgacgacgtctccgactgg
ctcgaaggcgtggataacgccgagacaccggcggcggcggtcgcgccccagctcgaggcc
ctgcgcgacctggcccaggcccggtcggcctggcgcgaacagaacacgctggtgttcaag
gatcgccccgactacgtcttcgatctcgacgacgccggcaacgtgctcgctatccgtacc
gagacccgccgcaccggccagcgcatgatcgaagaggcgatgatcgtcgccaacgcctgc
tgcgccgacctgctgtcgcgggaagtggggcacggtatcttcaacgtccaccacgccttc
gagccggagaagctcgacccggcgctggagttcctcgccgcccaggggatcgaggtggaa
cgcgaacagctcagcgagctgccgcgctaccgcgagctgcgccgggcgctggacagccgc
gaggacgcctggctcgacgcccgcctgcgccgcttccagggttacaccaacatgtcggcc
cgccccggcccccacttcggcctgggcctgcctgcctacgccacctggacctcgccgatc
cgcaagtacggcgacatggtcaatcatcgcctgatcaagcgcgtgctcaagggtgaagcg
gcgccggcggaagccagccagcggctgaccgagcagctgaccgaacgccgccgactgaac
cgaatggccgagcgcgacgtcaaagactggctctacgtgcgctatctggggcagttcctg
gatcaaggcacggtgtacgacgccgatatcatcgatatccgccgcggtggcatgcgcgtc
cggctgagcgccaacggcgccaccgctttcattcccgcgccgatgctgcacagcgaccgc
aatcaggtggcgatcgacgacaaggaaggccgcatccagatcgccggcgagccgcgctat
caactgggcggcacgctgcgcgtcaagctcgtcgaggcgcgcgaagcgacccgctcgctg
gtggcgacacccgccgagtga
DBGET
integrated database retrieval system
