Salinicola sp. JS01: QO259_12565
Help
Entry
QO259_12565 CDS
T09138
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
sajs
Salinicola sp. JS01
Brite
KEGG Orthology (KO) [BR:
sajs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sajs03009
]
QO259_12565 (rsmB)
Enzymes [BR:
sajs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
QO259_12565 (rsmB)
Ribosome biogenesis [BR:
sajs03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
QO259_12565 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
FtsJ
Motif
Other DBs
NCBI-ProteinID:
WIX31647
LinkDB
All DBs
Position
2743958..2745319
Genome browser
AA seq
453 aa
AA seq
DB search
MSAISARAVAAKLLVPVINGEGSLASLDGEIAAHAVAERDRGFVKALCFGVCRAYPRLDA
LAAELLRQPFKKRDSDVQALLLLGLYQLLHMRVPAHAAVSETAGAARGLGKAWATRVLNG
CLRRFQRESVALQAKVDRDPPVALWHPAWLLKALRQAWPDAWQTLCAANNEAGPMTLRVN
RRRSTREAYLERLTAAGIEASACQFAADGIQLAAAVDVHQLPGFAEGDVSVQDESAQLCA
DLLAPALDGRDGARVFDACAAPGGKSAHLLERFTLDLAASDIDPGRLARVGATLERLGLD
ARLSALDASSATLAETLGQTPENTDAAAPSAGFDAILLDAPCSGTGVIRRHPDIKLTRRA
SDIGDLAALQARLLDNLWRQLAPGGTLLYATCSVLPAENAEQIAAFLARTPDARATTPDD
LAWGQPAGQGRQLLTAQNGHDGFFYARLEKATP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaatcagtgcacgggccgtggccgccaagctgctggtgccggtgatcaacggc
gaaggctcgcttgcctcactcgacggcgagatcgccgcccacgcggtggccgagcgcgac
cgcggcttcgtcaaggcgctctgcttcggtgtctgccgcgcttatccgcgcctagatgca
ttggccgcggagctgctgcgccagccgttcaagaagcgcgacagcgacgtgcaggcgctg
ctgctgctgggtctctaccagctcctgcacatgcgcgtgccggcgcacgccgccgtcagc
gagaccgccggtgccgcccgtggcctgggcaaggcctgggccacccgcgtgctcaacggc
tgcctgcgccgcttccagcgcgaatcggtggcactccaggccaaggtcgaccgtgacccg
ccggtggcgctgtggcaccccgcctggctgctcaaggcgctgcgccaggcctggcccgat
gcctggcagacgctgtgcgcggccaacaacgaggccgggcccatgaccctgcgcgtcaat
cgccgccggagcacgcgcgaggcctacctcgaacgcctcactgccgccggcatcgaggcc
agcgcctgccagttcgccgccgacggcatccagctcgccgcggcggtggacgtgcaccag
ctgccgggcttcgccgagggcgacgtcagcgtgcaggacgaatcggcccagctctgcgcc
gacctgctggcgccagcgctcgacggccgcgatggcgcccgggtgttcgacgcctgcgcc
gcccccggcggcaagagcgcgcatttgctggagcgtttcaccctcgacctcgccgccagc
gatatcgaccccggccggctggcgcgggtcggtgccaccctggagcggctgggtctcgac
gcccgcctgagcgccctcgatgccagcagcgccacgctcgccgagacgctgggccagacc
ccggagaataccgatgccgcggcgccgagcgcgggcttcgatgccatcctgctcgacgcc
ccctgctcgggtaccggggtgatccgccgccacccggacatcaagctgacccgccgcgcc
agcgacatcggcgacctcgccgcgctgcaggcgcgtctgctcgacaacctgtggcgccag
ctcgcccccggcggcaccctgctctacgccacctgctcggtgctgccggccgagaacgcc
gagcagatcgccgccttcctggcgcgcaccccggatgcccgcgccaccacccccgacgac
ctcgcctggggccagcccgccggtcaaggccgccagctcctgaccgcgcagaacggccac
gacggcttcttctacgcccggctggagaaggcgacgccgtaa
DBGET
integrated database retrieval system
