Salinicola sp. JS01: QO259_13490
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Entry
QO259_13490 CDS
T09138
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
sajs
Salinicola sp. JS01
Brite
KEGG Orthology (KO) [BR:
sajs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sajs03009
]
QO259_13490 (dbpA)
Enzymes [BR:
sajs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QO259_13490 (dbpA)
Ribosome biogenesis [BR:
sajs03009
]
Prokaryotic type
rRNA helicases
QO259_13490 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
P-loop_SecA
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
WIX31819
LinkDB
All DBs
Position
complement(2939643..2941058)
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AA seq
471 aa
AA seq
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MSDTATSTDFSTLALNPALKHNLDSLGYHTMTPIQALALPPILAGRDVIGQGRTGSGKTA
AFGLGLLQALDVARFEVQALVLCPTRELADQVAEELRRLARQLANVKILTLCGGTPMGPQ
LNSLAHGAHVVVGTPGRLEAHLRKGTLDLSALRVLVLDEADRMLDMGFQEALETIVAATP
RSRQTLLFSATYADAVRPVAERMLRDPVSLSVPETHGRESIHQHFHRVADDAARLPALMR
LLRHYRPRSSIVFCNTRQETESVAQALAQAGFSAEALHGERDQRERDRLLIRFAQGSLSI
LVATDVAARGLDIDALDAVFNYQLARELESHVHRVGRTGRAGEQGTACTLVSERETYRLE
RLAELLAEPPEFEPLPAGGDETPFQPAMATLEIDAGKQQKIRPGDILGALTRGGDAEGIE
GGRVGKIKVTDRAAFVAVEREIARQALAVLNAGKLKGRRCRARLVVDAGGR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacaccgcgacctccaccgacttcagcacgctggctctgaacccggcgctcaag
cacaaccttgactcgctgggctaccacaccatgacgccgattcaggcgctggcgctgccg
ccgatcctcgccgggcgcgacgtgatcggccaggggcgcaccggctccggcaagaccgct
gccttcggactcggcctgctccaggcgctcgatgtcgcgcgcttcgaggtgcaggcgctg
gtgctctgcccgacccgcgagctggccgaccaggtcgccgaggagctgcgccggctggcg
cggcagctggccaacgtcaagatcctgaccctgtgcggtgggacgccgatgggcccgcag
ctcaactcgctggcccacggcgcgcacgtggtggtgggcacgccgggccggctcgaagcg
cacctgcgcaagggcacgctcgatctgagtgcgctgcgcgtgctggtgctcgacgaagcc
gaccgcatgctcgacatgggctttcaggaggcgctggagacgatcgtcgcggccacgcca
cgttcacgccagacgctgctgttcagcgccacctacgccgacgccgtgcgcccggtcgcc
gagcgcatgctgcgcgacccggtcagcctgagcgtgcccgagacccacggccgggagagt
atccaccagcacttccaccgggtcgccgacgacgccgcacggctgccggcgctgatgcgc
ctgctgcgccactatcggccacgctcgagcatcgtcttctgcaatacccgccaggagacc
gagagcgtggcgcaggcgctggcgcaggcgggattcagcgccgaggcgctacacggcgag
cgcgaccagcgcgagcgcgaccgcctgttgatccgttttgcccagggcagcctgtcgatc
ctggtcgccaccgacgtggcggcgcgtggtctggatatcgacgccctcgatgcggtattc
aactaccagctggcgcgggagctcgaatcccacgtgcaccgggtcgggcgcaccggccgc
gccggcgagcagggcacggcctgcaccctggtgagcgaacgcgagacctatcgtctggag
cggctggcggagctgctcgccgagccgcccgaattcgagccgctgcccgcgggcggcgac
gaaacgccgttccagccggccatggccacgctcgagatcgacgccggcaagcagcagaag
atccgccccggcgatatcctcggtgccctgacccgcggcggcgacgccgaaggcatcgag
ggcggccgggtcggcaagatcaaggtgaccgatcgtgccgccttcgtcgcggtggagcgg
gagatcgcgcgccaggccctggcggtgttgaacgccggcaagttgaaagggcggcgctgc
cgtgctcgtctggtggtcgatgccggtggtcggtga
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