Salinicola sp. JS01: QO259_13850
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Entry
QO259_13850 CDS
T09138
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sajs
Salinicola sp. JS01
Pathway
sajs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sajs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QO259_13850 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sajs03400
]
QO259_13850 (xseA)
Enzymes [BR:
sajs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
QO259_13850 (xseA)
DNA repair and recombination proteins [BR:
sajs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
QO259_13850 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Ribosomal_S21
Stathmin
Motif
Other DBs
NCBI-ProteinID:
WIX31889
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All DBs
Position
3027003..3028385
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AA seq
460 aa
AA seq
DB search
MPAPTPQALSVSDLNRQARQMLERGFGDCWVEGEISGLARPASGHLYFTLKDARAQLRCA
FFRNRASLSRVALKDGDRIKVRGRVSIFEPRGDYQLIVDAVQASGEGELMAAYERLKRQL
EAEGVFANARALPYPPRHLALITSPSGAAIRDVLAVLAARWPLTRVSLFPTPVQGREAPP
ALIRALALVNRQARRDAETPVETRAPGAPEPFDAVLITRGGGSLEDLWAFNDEHLARAIF
HSRLPVLAAIGHEVDFTLAEFAADLRAPTPSAAAERLVPDRRELSAGLAQQRARLVRAWQ
RRADAESQRLDHLRARLRHPGERLAQQRQHLDGLERRLRLAMRQRLQQEHQRYDATQRRF
ALLDPRRTLGQARERVERLGTRLEAAQQMRLRQERQRLEGVARELNAVSPLAVLGRGYAI
LQDDSGQVIRAASQTQPGQTLTARLGEGRLKLEVKRRLKR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccccgacgccccaggccctctccgtcagcgatctcaaccgccaggcccgccag
atgctggaacgcggcttcggcgactgctgggtcgagggcgagatctcggggctggcgcgc
cccgcttccggccatctctatttcaccctcaaggatgcccgggcgcagctgcgctgtgcc
ttcttccgcaaccgcgccagcctctcccgggtagcgctgaaggatggcgaccgcatcaag
gtgcgcgggcgggtgtcgatcttcgagccgcgcggcgactatcagttgatcgtcgatgcg
gtgcaggcgagcggcgaaggcgagctgatggcggcctatgagcggctcaagcgtcagctg
gaggcggagggcgtgttcgccaatgcgcgcgccctgccctatccaccacgccatctggcg
ctgatcacctcacccagcggcgcggcgatccgcgatgtactggcggtgctcgcggcgcgc
tggccgctgacccgggtgagcctgttcccgacgccggtacaggggcgcgaggcgccgccg
gcgctgatccgtgcactcgcgctggtcaaccgccaggcgcggcgggacgccgagacgccg
gtcgagacgcgtgcaccgggcgcccccgagccgttcgatgccgtgctgatcacccgcggc
ggcggcagcctggaggatctttgggcgttcaatgacgagcatctggcacgggcgatcttt
cattcgcgcctgccggtgctggctgccatcggccacgaggtggatttcaccctggccgag
ttcgccgccgacctgcgcgcgccgactccctcggcggcggcggagcggttggtgccggac
cgccgcgagctgagtgcagggctggcccagcagcgcgcccggctcgttcgcgcctggcag
cggcgtgcggatgccgagtcgcagcgtctggatcatctgcgcgcccggctgcgccacccc
ggcgagcggctggctcagcagcgccagcatctggacgggctggagcggcgcctgcgtctg
gcgatgcgccagcgcctgcagcaggagcaccagcgctacgacgccacccagcgccgcttt
gccctgctcgaccccagacgcaccctgggccaggcccgcgagcgggtcgagcgtctgggc
acgcgcctcgaggccgcccagcagatgcggctgcgccaggagcgccagcggctcgaaggg
gtcgcgcgggaactcaacgcggtcagcccgctggcggtattggggcgcggctacgccatc
ctgcaggatgacagcggccaggtgattcgcgccgccagccagacccagccgggccagacg
ctcaccgcccgcctcggcgaggggcgtctgaagctggaagtgaagcggcgtctgaagcgc
tga
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