Salinicola sp. JS01: QO259_14205
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Entry
QO259_14205 CDS
T09138
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sajs
Salinicola sp. JS01
Pathway
sajs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sajs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QO259_14205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sajs03400
]
QO259_14205
Enzymes [BR:
sajs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QO259_14205
DNA repair and recombination proteins [BR:
sajs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QO259_14205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_16
HypA
zf-CHY
FLAD1_M
nSTAND3
TrwB_AAD_bind
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
WIX31951
UniProt:
A0A9Y2D8H6
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All DBs
Position
3115435..3117684
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AA seq
749 aa
AA seq
DB search
MADFKPDAVAPATQARVLRVAVSTPLRRLFDYRPAGAPPAGGWRAGIRVKVPFGRRELVG
IVIACAAESDLPLAQLKPIVACLDAEPLPADWLWLCEFTARYYQHALGDTLHNALPGPLR
QGRPLEARTRERWRLETSEATALEQLARAPRQRELVTLLAQHRHGLVTSAVSAQGFTRAQ
LQGLARRGLVSCHEEPLTASAAPSGPLLATPALTLNREQAAALAALHEGLDRYHPCLLHG
VTGSGKTEVYLQLIEAVLGQGKQALVLVPEIGLTPQTLARFRKRFRVPVVALHSGLTDLE
RLDAWEAARSGRAPVIIGTRSAIFTPLARPGAIIVDEEHDGSFKQQDGLRYHARDLAIAR
AHREGIPILLGSATPSLESLAQARSGRYRHLRLTTRASRHAPARLELTDLRGRVRQGGLI
PPVIEAIRQALAAEGQVLVFINRRGFSPSLACHQCGWIAECSHCDSRLTLHRQPPRLVCH
HCEHQQPQPDACPSCGSADLRPLGAGTERTEETLTTLFPKTPIYRIDRDSTRRKEALDQV
LGEIRRGEPSLLVGTQMLAKGHHLPHVTLVVVVNADAGLYASDFRALEQSAQLLIQVAGR
AGRAERPGRVLVQTLHPDDPNLRLLADSGYDALAYQLLEERRLAALPPYRHLALARFEAV
KEADAQATAEAAGEALREWLATHGSPVHALGPVPAPMERRQNRYHVQLMLSAERRSALHE
AAAWLVARLEQESSRRVRWSLDVDPMSLS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
ttggcagatttcaagcccgacgccgtagcgccggccacgcaggcgcgcgtgctgcgggtc
gccgtatccaccccgctgcgccggctgttcgactaccgccccgccggcgccccgcctgcc
ggcggctggcgcgcgggcatccgggtcaaggtccccttcgggcgccgcgagctggtgggc
atcgtcatcgcctgcgccgccgagagcgacctaccactggcccagctcaagccgatcgtc
gcctgcctcgatgccgaaccgctgccggcggactggctgtggctgtgcgaattcaccgcg
cgctactaccagcacgcgctgggcgacaccctgcacaacgccctgccgggccccctgcgc
caagggcgcccgctggaagcgcgcacccgcgaacgctggcgtctggagacctcggaggcg
acggcactggaacagctcgcccgcgcgccgcgccagcgcgagctggtcacgctgctcgcc
cagcatcgccacggcctggtcaccagcgcagtcagcgcccagggcttcacccgggcccag
ctccagggcctggctcggcgcggcctggtcagttgccacgaagagccgctgaccgcatcg
gcggcgccctccgggccgctgctggcgaccccggcactgaccctcaaccgcgagcaggcg
gcggcgctggcggcactgcacgaagggctcgatcgctaccatccctgcctgctccacggc
gtcaccggcagcggcaagaccgaggtctatctacaactgatcgaagccgtgctcggccag
ggcaagcaggcgctggtgctggtgccggagatcggcctcaccccgcagaccctggcgcgc
tttcgcaagcgtttccgggtgccggtggtggcgctgcactccgggctcaccgacctcgag
cgcctggacgcctgggaggccgcgcgcagcggccgcgcgccggtgatcatcggcacccgc
tcggcgatcttcaccccgctggcgcgtcccggcgcgatcatcgtcgacgaggagcacgac
ggctcgttcaagcagcaggatggcctgcgctaccacgcccgcgatctcgccatcgcccgc
gcccaccgcgagggcatcccgatcctgctgggcagcgccacgccgtcactggagagcctg
gcccaggcgcgcagcgggcgctaccgccatctgcgcctgaccacccgcgccagccgccac
gccccggcgcggctggagctgaccgacctgcgcggccgcgtgcgccagggcgggctgatc
ccgccggtgatcgaggcgatccgccaggccctggcggcggaggggcaggtgctggtgttc
atcaatcggcgcggcttctcgccctcgctggcctgtcatcagtgcggctggatcgccgaa
tgcagccactgcgactcacgtctcaccttgcatcgccaaccgccgcgcctggtgtgccac
cactgcgagcaccagcagccgcagccggacgcctgccccagctgcggcagcgccgacctg
cgccccctgggcgccggtaccgagcgcaccgaggagacgctgacgacactcttccccaag
acgccgatctatcgcatcgatcgcgacagcacccggcgtaaggaggcactcgatcaggtg
ctcggcgagatccgccgcggcgagccgagcctgctggtcggcacccagatgctggccaag
ggccaccatctgccgcatgtcacgctggtggtggtggtcaacgccgacgccgggctctat
gccagcgattttcgcgccctggagcagagcgcccagctgctgatccaggtcgccgggcgc
gccgggcgcgccgagcgtcccggccgcgtgctggtacagacgctgcacccggacgacccc
aacctgcgcctgctggcggacagcggctacgacgccctcgcctaccagctgctggaagag
cggcgcctggccgcgctgccgccctatcgtcacctggcgctggcacgcttcgaggcggtc
aaggaggccgacgctcaggccaccgccgaggccgccggcgaggcgctgcgcgagtggctg
gccacacacggctcgccggtgcacgccctggggccggtgccggcacccatggagcggcgc
cagaaccgctaccatgtccagctgatgctgagcgccgagcgccgcagcgcgctgcacgag
gccgccgcctggctggtcgcgcgactggagcaggagagctcgcgccgggtgcgctggtca
ctggatgtcgacccgatgagcctgagctga
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