Salinicola sp. JS01: QO259_14410
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Entry
QO259_14410 CDS
T09138
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sajs
Salinicola sp. JS01
Pathway
sajs03030
DNA replication
sajs03430
Mismatch repair
sajs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sajs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QO259_14410 (dnaE)
03430 Mismatch repair
QO259_14410 (dnaE)
03440 Homologous recombination
QO259_14410 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sajs03032
]
QO259_14410 (dnaE)
03400 DNA repair and recombination proteins [BR:
sajs03400
]
QO259_14410 (dnaE)
Enzymes [BR:
sajs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QO259_14410 (dnaE)
DNA replication proteins [BR:
sajs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QO259_14410 (dnaE)
DNA repair and recombination proteins [BR:
sajs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QO259_14410 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WIX31990
UniProt:
A0A9Y2G424
LinkDB
All DBs
Position
complement(3160549..3164055)
Genome browser
AA seq
1168 aa
AA seq
DB search
MTTPFVHLRVHSEYSLVDGLVRLKPLINASVEAGMPALAVTDDTNLFGLVKVYKAAQGAG
LKPVIGADFWLHNAHDESHPYRLTLLAMNDTGYRNLTELISRAWTDGQRQNQAILDKQWV
FEQSEGLIALSGAREGEIGRFLIAEHVDTARTLLAEWNQYFPGRFYLELQRTGRQYDEEC
VYHSVRLASETGTPVVATNDVRFLAREDFWAHETRVSIGEGKALEDPRRERKYTEEQYLK
TPEEMAALFADIPEALENSVLIAARCNATVRLGEIFLPEYPIPEGMTQDTFFRKISHDGL
SERLNQLFEGDNPIYPGRVLADYEPEYRKRLDFELDIILKMGFPGYFLIVMDFIQWAKDN
DIPVGPGRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEKRDRV
IDYVADRYGRNAVSQIVTFGTMAAKAVVRDVARAQGKPYSMGDKLSKLIPFEVGMTLAKA
IEQEPQLKEYLEADEEAAEIWEMALKLEGITRGTGKHAGGVVIAPTKLTDFSPLLCEPDG
SGLVVQFDKNDVEDAGLVKFDFLGLRTLTIIDWALEMVDVVRGREGQEPLDISTIPLDDK
PTFDMLKKAETTAVFQLESRGMKELIKRLQPDSLEDMIALVALFRPGPLQSGMVDDFINR
KHGRAELAYPHPDYQHELLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGQADMLRRAMGK
KKPEEMAKQRAGFMEGCANNGIDKDLAGNLFDLVEKFAGYGFNKSHSAAYGLVSYQTAWL
KAHYPGPFMAAVLSTEMDNLDKVVPLIEECRHIGLTVTPPDVNVGAYKFTVDDSARVVYG
LGAIRGVGEGPIAAIVEARQADGPFTDLFDFCRRIDGKRMNKRTLEALIRSGALDNLGPS
RAVMAASLDAALKAASQNQTNQNLGMIDMFGEAFVDTADGDVYADYRHARDWSDKERLAG
EKDTLGLYLTGHPIDEYEHELKRFVATRIVDLKPSREPQRVAGLVVAMRTMKSKRGDTMA
FVTLDDRTGRIEASLFGELFDQVRGQLNADQVLIIEGEVSSDDYSGGLRLRSKEVTLMAD
ARARFGEAIELSVDGARLNGRFSRSLHDSLTPWLSERGLPVRVRYRNASASGCFELAEAW
RVSPSDELITALRDVEGHESVALRYRGG
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgactacacctttcgttcatctccgtgttcacagcgagtactccctggtcgacggcctg
gtgcgcctcaagccgctgatcaatgccagcgtggaggccggcatgccggccctggcggtc
accgacgacaccaacctgttcggcctggtgaaggtctacaaggcggcccagggggccggt
ctgaagccggtcatcggcgccgacttctggctccacaacgcccatgacgagagccatccc
tatcggctcacgctactggcgatgaacgacaccggctaccgcaatctgaccgagctgatc
tcgcgcgcctggaccgacggccagcgccagaaccaggcgatcctcgacaagcagtgggtg
ttcgagcagagcgaagggctgatcgccctctccggcgcgcgcgagggtgagatcgggcgc
tttctgatcgccgagcacgtcgataccgcgcgcacgctgctggcggagtggaaccagtac
ttccccgggcgcttctatctcgaactgcagcgcactgggcgccagtacgacgaggagtgc
gtctaccactccgtgcgcctggccagcgagaccggcaccccggtggtggccaccaacgat
gtgcgcttcctcgcccgcgaggacttctgggcccacgagactcgggtctcgatcggtgag
ggcaaggcgctggaggatccgcggcgcgagcgcaagtacaccgaggagcagtatctcaag
acccccgaggagatggcggcgctgttcgccgatatccccgaggcgctggagaacagcgtg
ctgatcgcggcgcgctgcaacgccacggtgcgtctgggcgagatcttcctgccggagtat
ccgatccccgagggcatgacccaggacaccttctttcgcaagatctcccatgacggtctc
agcgagcgtctgaaccagctgttcgagggcgacaacccgatctatcccgggcgcgtgctc
gccgactacgagcccgagtaccgcaagcgcctcgacttcgaactcgacatcattctcaag
atgggcttccccggctacttcctgatcgtgatggacttcatccagtgggccaaggacaac
gatatcccggtagggccggggcgtggttccggggccggctcgctggtcgcctatgcgctc
aagatcaccgatctcgatccgctggagtacgacctgctgttcgagcgcttcctcaacccc
gagcgcgtctcgatgcccgacttcgacgtcgacttctgcatggagaagcgcgaccgggtg
atcgactacgtggccgaccgctacggccgcaacgcggtctcgcagatcgtcaccttcggc
accatggcggccaaggcggtggtgcgcgacgtggcgcgcgcccagggcaagccttactcg
atgggcgacaagctctccaagctgatcccgttcgaggtcggcatgaccctggccaaggcg
atcgagcaggagccgcagctcaaggagtatctcgaggccgacgaggaggccgccgagatc
tgggagatggcgctcaagctcgagggcatcacccgcggtaccggcaagcacgccggcggg
gtggtgatcgcaccgaccaagctcaccgacttctcgccgctactgtgcgagccggacggc
tccgggctggtggtgcagttcgacaagaacgacgtcgaggacgccgggctggtcaagttc
gacttcctcggcctgcgcacgctcaccatcatcgactgggcgctggagatggtcgatgtg
gtgcgcgggcgtgaggggcaggagccgctggatatcagcaccatcccgctcgatgacaag
ccgaccttcgacatgctcaagaaggccgagaccacggcggtgttccagctcgaatcccgc
ggcatgaaggagctgatcaagcgcctgcagcccgactcgctggaggacatgatcgccctc
gtcgcgctgttccgtccggggccgctgcagtcgggcatggtggatgacttcatcaaccgt
aagcacggccgtgccgagctggcctatccccacccggactaccagcacgagctgttgaag
ccggtgctcgaacccacctacggcatcatcctctaccaggagcaggtgatgcagatcgcc
caggtcctggccggctacaccctgggccaggcggacatgctgcgccgtgccatgggcaag
aagaagccggaggagatggccaagcagcgcgccggcttcatggaggggtgtgccaacaac
ggcatcgataaggacctggccggcaacctgttcgacctggtggagaagttcgccggctac
ggcttcaacaagtcgcactcggcggcctacgggctggtctcctatcagaccgcctggctc
aaggcgcactatccggggccgttcatggccgcggtgctctccaccgagatggacaacctc
gacaaggtcgtgccgctgatcgaggagtgccgccacatcgggctgacggtgaccccgccg
gacgtcaacgtcggcgcctacaagttcaccgtcgatgacagcgcccgggtggtctacggc
ctgggggcgatccgcggcgtgggcgagggcccgatcgcggcgatcgtcgaggcgcgccag
gccgacgggccgttcaccgatctgttcgacttctgccgccgcatcgacggcaagcgcatg
aacaagcgcaccctcgaggcgctgatccgctccggcgcgctcgacaacctggggccgtcg
cgggcggtgatggcggcctcgctggacgccgcgctcaaggccgcgtcgcagaatcagacc
aaccagaacctgggcatgatcgacatgttcggcgaggccttcgtcgataccgccgatggt
gacgtctacgccgactatcgccatgcccgcgactggagcgacaaggagcgcctggccggc
gagaaggataccctcgggctctatctcaccggccacccgatcgacgagtacgagcacgag
ctcaagcgtttcgtggctacccggatcgtcgatctcaagccgtcgcgggagccgcagcgc
gtggccgggctggtggtggcgatgcgtaccatgaagtccaagcgcggtgacaccatggcc
ttcgtcaccctcgacgaccgcaccgggcgcatcgaggcgtcgctgttcggcgagctgttc
gatcaggtgcgcggccagctcaatgccgatcaggtgctgatcatcgaaggcgaggtctcc
agcgacgactactccggcggtctgcgcctgcgcagcaaggaggtcacgctgatggcggac
gcgcgtgcccgtttcggcgaggcgatcgagctctcggtcgatggcgcacgtctcaatggg
cgcttctctcgctcgctccatgacagcctgacgccgtggctcagcgagcgcgggctgccg
gtgcgggtgcgctatcgcaacgccagtgccagcggctgcttcgagctcgccgaggcgtgg
cgagtgtcgcccagcgacgagctgatcaccgcgctgcgcgacgtcgagggccacgaatcg
gtcgccctgcgctaccgcggcggttga
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integrated database retrieval system
