Salinicola sp. JS01: QO259_18995
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Entry
QO259_18995 CDS
T09138
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sajs
Salinicola sp. JS01
Brite
KEGG Orthology (KO) [BR:
sajs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sajs03032
]
QO259_18995 (gyrB)
03400 DNA repair and recombination proteins [BR:
sajs03400
]
QO259_18995 (gyrB)
Enzymes [BR:
sajs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
QO259_18995 (gyrB)
DNA replication proteins [BR:
sajs03032
]
Prokaryotic type
DNA Topoisomerases
QO259_18995 (gyrB)
DNA repair and recombination proteins [BR:
sajs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QO259_18995 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
HATPase_c_3
UFD1_N2
TcaA_2nd
Motif
Other DBs
NCBI-ProteinID:
WIX32863
LinkDB
All DBs
Position
4159785..4162199
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AA seq
804 aa
AA seq
DB search
MSEQAYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEIVDNSIDEALAGHCSEI
RIVIHPDESITVSDDGRGIPTDIHDEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEQLKLTIWRNRQVHEQVYHHGVPQAPLTVVGETEKSGTQISFKPSSETFANIE
FHYDVLAKRLRELSFLNSGVAIRLVDERDGREELFHYEGGLRAFVEHLNTNRTALNPVFH
FEVQREDGIGVEVAMQWNDTFAENVFCYTNNIPQRDGGTHMAGFRAALTRSLNSYIEAED
IQKKAKVATSGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVDQELSRQFADYL
VEHPNEAKAIVNKMIDAARAREAARKARDMTRRKGALDIAGLPGKLADCQEKDPSLSELY
LVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCGIGRE
EFNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGHVFIAQPPLYKIKRGK
QEMYLKDEQAMTDYLTTTALDGARLCVNADAPGIAGEQLEALVSQYRDVMKRIDRLSRVY
PNAVLRKMVHAAKLEEANLSDRGTLQQWIEALQVEMDSLIAHEGGPRYTFQLQEDTERGL
WLPSVSLTAHGVTTDYVWGIDFFRSADYRALAGLGETLDGLVEEGAYIARGERQKPIETF
YDALEWLMLEAQRGLSIQRYKGLGEMNPDQLWETTMDPQSRRMLRVSIEDAVAADQMFNT
LMGDEVEPRRDFIERFALVANLDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaggcctacgattcatcgagcatcaaggtcctcaaggggctggacgcggtg
cgcaagcgcccgggcatgtacatcggcgacaccgatgacggcaccggcctgcaccacatg
gtgttcgagatcgtcgacaactcgatcgacgaagcgctggccggccattgcagcgagatc
cgcatcgtcatccacccggatgagtcgatcaccgtctccgacgacggccgtggtatcccc
accgacattcacgacgaaggggtctccgccgccgaggtcatcatgaccgtgctccacgcc
gggggtaagttcgacgacaactcctacaaggtctccggtggcctgcacggggtcggggtg
tcggtggtcaatgcgctctccgaacagctcaagctgaccatctggcgcaatcgccaggtt
cacgagcaggtctatcaccacggcgtgccgcaggcgccgctgacggtggtcggcgagacc
gagaagtcgggcacccagatcagcttcaagccgtcgagcgagaccttcgccaacatcgag
ttccattacgatgtgctggccaagcgcctgcgcgagctgtcgttcctcaactccggcgtg
gcgatccgcctggtcgacgagcgtgacggtcgcgaggagctgttccactacgaggggggc
ctgcgcgccttcgtcgagcatctcaacaccaaccgcaccgcgctcaatccggtcttccac
ttcgaggtccagcgcgaggatggcatcggtgtcgaggtggcgatgcagtggaacgacacc
ttcgccgagaacgttttctgctacaccaacaacattccgcagcgcgatggcggcacccac
atggccggcttccgcgcggcgctgacgcgcagcctcaacagctacatcgaagccgaggac
atccagaagaaggccaaggtggcgacctccggcgacgatgcccgcgaaggtctcaccgcg
atcatctcggtcaaggtgccggatcccaagttctcctcgcagaccaaggacaagctggtc
tcctcggaggtcaagacagcggtcgatcaggagctgagccgtcagttcgccgactatctg
gtcgagcaccccaacgaggccaaggcgatcgtcaacaagatgatcgacgccgcgcgtgcc
cgcgaggcggcgcgcaaggcgcgcgacatgacccggcgcaagggcgcgctggatatcgcc
gggctgccgggcaagctggccgactgccaggagaaggaccccagcctctccgaactctac
ctggtcgagggtgactccgccggcggcagtgccaagcagggccgtgaccggcgtacccag
gcgatcctgccgctcaagggcaagatcctcaacgtcgagaaggcgcgcttcgacaagatg
ctctcttcggccgaggtgggcacgctgatcaccgcgctgggctgcggcatcgggcgcgag
gagttcaatccggacaagctgcgctaccactcgatcatcatcatgaccgatgccgacgtc
gacggttcgcacatccgtaccctgctgctgaccttcttcttccgccagatgccggagctg
atcgagcgcgggcacgtgttcatcgcccagccgccgctttacaagatcaagcgcggcaag
caggagatgtacctgaaggacgagcaggcgatgaccgactatctcaccaccaccgcgctg
gacggcgcccgcctgtgtgtcaatgccgacgcaccggggatcgccggcgaacagctcgag
gcgctggtgagccagtatcgtgacgtgatgaagcgcatcgaccggttgtcgcgggtctat
cccaatgcggtgctgcgcaagatggtccacgccgccaagctggaggaggccaacctgagc
gatcgcggcaccctgcagcagtggatcgaggcgctgcaggtggagatggattcgctgatc
gcccacgagggcggcccgcgctacaccttccagctgcaggaggacaccgagcgcggtctg
tggctgccgagcgtgtcgctcaccgcccacggtgtcaccaccgactacgtgtggggtatc
gatttcttccgcagcgccgactaccgcgcgctggcgggcctcggcgagaccctcgacggg
ctggtcgaggagggcgcctacatcgcccgtggcgagcgccagaagccgatcgagaccttc
tacgatgcgctggagtggctgatgctcgaggcccagcgcgggctctcgatccagcgctac
aaagggctgggcgagatgaacccggaccagctgtgggagaccaccatggatccgcagtcg
cggcgtatgctgcgggtctcgatcgaggacgcggtggctgccgaccagatgttcaacacc
ctgatgggtgatgaagtggagccgcgccgcgacttcatcgagcgcttcgcgctggtggcc
aatctggatatctga
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