Salinicola sp. JS01: QO259_19050
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Entry
QO259_19050 CDS
T09138
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
sajs
Salinicola sp. JS01
Pathway
sajs00541
Biosynthesis of various nucleotide sugars
sajs01100
Metabolic pathways
sajs01250
Biosynthesis of nucleotide sugars
Module
sajs_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
sajs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QO259_19050 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sajs01005
]
QO259_19050 (rfaD)
Enzymes [BR:
sajs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
QO259_19050 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
sajs01005
]
Core region
QO259_19050 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
WIX32874
UniProt:
A0A9Y2D5A1
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All DBs
Position
4176493..4177464
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AA seq
323 aa
AA seq
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MIVVTGGAGFIGANLVKALNARGRQDVMVVDDLSDGTKFVNLADCTLGDYLDKDDFLARV
QAELRGEIGGLPPIEAIFHEGACSDTTEWDGRFMLENNFEYSKTLLRYCQAKRIPFLYAS
SAATYGGSEVFVEAPEHEKPLNVYGYSKLLFDQYVRARWDSFETQVVGFRYFNVYGPREQ
HKGKMASVAFHHHNQVQRGENPKLFGAWDGFEAGMQSRDFVYVGDVVDVNLWFLDNPEVS
GIFNLGTGRAEPFKAIAETVIDFHARHGGAQGEIEYIDFPDELKGRYQSYTRADIGRLRE
AGYSGEFKTVREGVTAYLEWLNG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtagtcaccggcggggccggcttcatcggggccaatctggtcaaggcactcaac
gcgcgcggtcgccaggacgtgatggtggtcgatgacctcagcgatggcaccaagttcgtc
aatctggccgactgcacgctgggcgactatctcgacaaggacgacttcctggctcgggtc
caggccgaactgcgcggcgagatcggtggcctgccgccgatcgaggcgatcttccatgaa
ggcgcctgctcggataccaccgagtgggacgggcgcttcatgctcgagaacaacttcgag
tactccaagacgctgctgcgctactgtcaggccaagcgcatcccgtttctttatgcctcc
tcggcggcgacctatggcggcagcgaggtgttcgtcgaggcgccggagcacgagaagccg
ctcaacgtctacggctactccaagctgctgttcgatcagtacgtgcgtgcgcgctgggac
agcttcgagacccaggtggtgggctttcgctactttaacgtctacggcccgcgcgagcag
cacaagggcaagatggcgagtgtcgcctttcaccatcacaaccaggtccagcgtggcgag
aatccgaaactcttcggcgcctgggatggtttcgaggccggcatgcagagccgcgacttc
gtctatgtgggcgacgtggtcgacgtcaacctgtggttcctcgacaaccccgaggtctcg
ggcatcttcaatctgggcaccgggcgcgccgagccgttcaaggcgatcgccgagacggtt
atcgactttcatgcacgccatggcggggcccagggcgagatcgagtacatcgacttcccc
gatgagctcaaggggcgctatcagagctacacccgggccgatatcgggcgcctgcgcgag
gcgggctacagtggcgagttcaagaccgtgcgcgagggcgtcacggcctatctggaatgg
ctgaatggctga
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