Salinicola sp. JS01: QO259_19865
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Entry
QO259_19865 CDS
T09138
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sajs
Salinicola sp. JS01
Pathway
sajs00300
Lysine biosynthesis
sajs00470
D-Amino acid metabolism
sajs01100
Metabolic pathways
sajs01110
Biosynthesis of secondary metabolites
sajs01120
Microbial metabolism in diverse environments
sajs01230
Biosynthesis of amino acids
Module
sajs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sajs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QO259_19865 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QO259_19865 (dapF)
Enzymes [BR:
sajs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QO259_19865 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-ProteinID:
WIX33031
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Position
complement(4349757..4350590)
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AA seq
277 aa
AA seq
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MLLNFTKMHGLGNDFMVVDLISQRAYLRDEQIRRLADRHFGIGFDQLLLVEPPRQPDMDF
RYRIFNADGGEVENCGNGARCFARFVIDQRLTHKRELRVETLGGPLTLKVDSDGRVRVDM
GAPRFTPSAVPFSAEHDAPLHELQVEDQTLTLSVASMGNPHAVIEVEDVDSAPVETLGPA
LQRHPSFPRQVNVGFMQIESPHAIRLRVFERGAGETLACGTGACAAVACGIRRGVLASPV
EVTLRGGNLTLEWAGGDAPMIMTGPAERVFEGRVPLS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgaatttcaccaagatgcacggtctcggcaacgacttcatggtggtcgacctg
atcagccagcgcgcctacctgcgcgacgagcagatccgccgtctcgccgaccgccacttc
gggatcggcttcgaccagctgctgctggtggagccgccgcgccagcccgacatggatttc
cgctaccgtatcttcaatgccgacggcggtgaggtggagaactgcggtaacggcgcgcgc
tgtttcgcccgcttcgtgatcgaccagcgcctgacccacaagcgcgagctgcgcgtcgag
accctgggcggaccgctgacgctcaaggtcgactccgatggccgggtgcgggtggacatg
ggcgcgccgcgcttcactccgtccgccgtgccgttcagcgccgagcacgacgccccgctg
catgagcttcaggtcgaggaccagacgctgacgctgagcgtcgcctcgatgggcaacccg
cacgcggtgatcgaggtcgaggacgtcgacagcgccccggtggagacgctcggcccggcg
ctgcagcgccacccgagctttccgcgtcaggtcaatgtcggcttcatgcagatcgagtcg
ccccacgccattcgcctgcgcgtcttcgagcgcggcgccggcgagaccctggcctgcggt
accggcgcctgcgcggcggtggcctgcggcatccgccgtggcgtgctcgcgagcccggtc
gaggtgaccctgcgcggcggaaacctgaccctggagtgggccgggggcgacgcgccgatg
atcatgaccggcccggccgagcgggtcttcgaagggcgcgtgccgctgagctga
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