Streptococcus agalactiae A909 (serotype Ia): SAK_1590
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Entry
SAK_1590 CDS
T00278
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sak
Streptococcus agalactiae A909 (serotype Ia)
Pathway
sak03030
DNA replication
sak03430
Mismatch repair
sak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAK_1590 (holB)
03430 Mismatch repair
SAK_1590 (holB)
03440 Homologous recombination
SAK_1590 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sak03032
]
SAK_1590 (holB)
03400 DNA repair and recombination proteins [BR:
sak03400
]
SAK_1590 (holB)
Enzymes [BR:
sak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAK_1590 (holB)
DNA replication proteins [BR:
sak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAK_1590 (holB)
DNA repair and recombination proteins [BR:
sak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAK_1590 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
ABA44970
LinkDB
All DBs
Position
complement(1585393..1586256)
Genome browser
AA seq
287 aa
AA seq
DB search
MDLKRTQPKLLEKFNTILQSDRMSHAYLFSGNFASLDMALYLAQSQFCEKRQSGLPCQEC
RACRLIANGEFSDVKIIEPQGQLIKTETIKELTKDFSRSGFEGKSQVFIIKDCEKMHVNA
ANSLLKFIEEPQSSSYVILLTNDENNVLPTIKSRTQIFRFPKQLDMLVHQAEQAGLLKSQ
ASLLAQVADDPKHLEILLTNKKLLDYLNLSQQFVTTLAKDRQTAYLEVSRLTSQVVDKND
QAFVFQWLTIMLAKEGQLYDLENTYRAQQMWKSNVSFQNSLEYMVLS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaagcgaacacaacccaaattgctggaaaagtttaatactattttacagtca
gataggatgagtcatgcctatcttttttcgggaaattttgcaagtctagatatggcactt
tatttagcacaaagtcagttctgtgaaaagcgccagagtggtttaccatgtcaagagtgt
agagcctgtcgtttaatcgctaatggggaattttcagatgttaaaatcatagaaccacag
gggcaacttattaagacagagactataaaagagctgactaaagatttttcaagatcaggt
ttcgaagggaaatcacaggtctttatcatcaaagattgcgaaaaaatgcatgtcaatgca
gccaacagtcttttgaaatttattgaagaacctcaaagttcatcttatgtcatcttattg
actaatgatgaaaacaatgttttgccaacaattaagagtagaacgcaaatttttcgtttt
ccaaaacaattggacatgttggttcatcaagctgaacaagcaggattgctaaaatcacaa
gctagcttattagctcaagtagcagacgatcctaaacatttagaaatattgttgactaac
aaaaagttattagattacttgaatttaagtcaacagtttgtgacgactttggcaaaagat
aggcaaactgcttatttagaagtatctcgcttgacatcgcaagttgtagataaaaatgat
caggcatttgtttttcaatggctgacaataatgctggctaaagaaggccaactttatgat
ttagaaaatacttatagagctcagcaaatgtggaagagcaatgttagttttcaaaatagt
ttagagtatatggtgctttcttag
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