Streptomyces akebiae: K1J60_07390
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Entry
K1J60_07390 CDS
T08702
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sakb
Streptomyces akebiae
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
K1J60_07390
Enzymes [BR:
sakb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
K1J60_07390
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
QYX82808
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Position
complement(1694823..1696628)
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AA seq
601 aa
AA seq
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MVAAGLTTFTGTPAEAATARQVERLDRGVVSVHVDSGNLVSWRWLGTDPNDVSFNVYRVG
TKVNATPITGSTNYFHAGAPAQADYTVRAIVNGVEQGDSVHAVQLRTGYKDVPISAPAGG
TTPDGVAYTYEANDASVGDLDGDGALEFVLKWQPTNAKDNSQSGYTGNTIIDGIKLDGTR
LWRIDLGRNIRSGAHYTQFQVYDYDGDGKAEIAAKTADGTVDGAGTVIGSSSADHRNSSG
YILTGPEYLTMFNGQTGRAMQTVDYVPGRGTVSSWGDSYGNRVDRFLAGTAYLDGARPSL
IMARGYYTRSVIAAWDWRGGSFTRRWTFDTSSSTNSGRGYDGQGSHSLSVGDVDNDGRDE
IVYGAMAVDDNGGALWTTRTGHGDAQHLGDLDASTPGLEYFKVSESTSQPAELYINPANG
AVRWQLAACCDNGRGVAGDIYAGNDGPEMWSASDTSIRDEAGATKGREPSSVNFLSWWDG
DPVRELLDGTRIDKYGTSAETRLLTGSGVSSNNGTKATPALSGDILGDWREEVVWRTSGN
TALRIYSTPIETGTKITTLLHDPMYRTGLAWQNTAYNQPPHTSFFIGANMPTAPRPTVYT
P
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
ctggtcgccgccggactcaccacgttcaccggcacgcccgccgaggccgcgaccgcccgc
caggtcgagcgcctcgaccggggcgtggtcagcgtgcacgtcgacagcggcaacctggtc
agctggcgctggctgggcaccgacccgaacgacgtgtcgttcaacgtctaccgggtcgga
acgaaggtcaacgcgacgccgatcaccggctcgacgaactacttccacgccggcgccccc
gcccaggccgactacacggtccgcgcgatcgtgaacggtgtggagcagggcgactcggtg
cacgcggtccaactgcgcaccggctacaaggacgtcccgatcagcgcacccgccggcggc
accaccccggacggcgtcgcctacacctacgaggccaacgacgcctccgtgggcgacctc
gacggcgacggcgccctggagttcgtcctgaagtggcagccgacgaacgccaaggacaac
tcccagtccggctacaccggcaacacgatcatcgacggcatcaagctcgacggcacccgg
ctgtggcgcatcgacctgggccgcaacatccgctcgggcgcgcactacacccagttccag
gtgtacgactacgacggcgacggcaaggcggagatcgccgccaagacggcggacggcacg
gtcgacggggcggggacggtgatcggcagctcctccgccgaccaccgcaactccagcggc
tacatcctgacggggcccgagtacctgaccatgttcaacgggcagaccgggcgcgcgatg
cagaccgtcgactacgtcccgggccggggcaccgtctcgtcctggggcgactcgtacggc
aaccgcgtggaccgcttcctcgccggtaccgcctatctcgacggcgcccgcccctccctg
atcatggcgcgcggctactacacccgctcggtgatcgcggcctgggactggcggggcggc
tccttcacccgccgctggaccttcgacaccagctcctccaccaactccggccggggctac
gacggccagggctcgcacagcctctccgtcggtgacgtcgacaacgacggccgggacgag
atcgtgtacggcgcgatggccgtggacgacaacgggggcgccctgtggaccacgcggacg
ggccacggcgacgcccagcacctgggcgacctcgacgcgtccacccccggcctggagtac
ttcaaggtctccgagtccacctcgcagcccgccgagctgtacatcaaccccgcgaacggc
gcggtccgctggcagctcgccgcctgctgcgacaacggccggggcgtcgccggggacatc
tacgccggcaacgacgggcccgagatgtggtcggcctccgacacctccatccgcgacgag
gcaggcgcgacgaagggccgcgagccctcgtcggtcaacttcctctcctggtgggacggc
gacccggtccgtgaactcctcgacggcacccggatcgacaagtacggcacctccgccgag
acccggttgctgaccggatccggggtctcctcgaacaacgggacgaaggcaacccctgcc
ctctccggcgacatcctcggcgactggcgcgaggaggtcgtctggcgcaccagcggcaac
acggcgctgcggatctactcgaccccgatcgagaccggcacgaagatcacgaccctgctc
cacgacccgatgtaccgcacgggcctggcctggcagaacaccgcctacaaccagcccccg
cacaccagtttcttcatcggtgccaacatgccgacggcgcccaggccgacggtgtacacg
ccgtag
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