Streptomyces akebiae: K1J60_10015
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Entry
K1J60_10015 CDS
T08702
Name
(GenBank) rhamnogalacturonase B precursor
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sakb
Streptomyces akebiae
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
K1J60_10015
Enzymes [BR:
sakb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
K1J60_10015
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
DUF4397
Motif
Other DBs
NCBI-ProteinID:
QYX76803
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Position
2294305..2295987
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AA seq
560 aa
AA seq
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MSGSPDRTTLGRRGFVVGTAATAAGAALAGPLAGTARAATFGYSDDGTNYVIDTGANLVF
KVRKSNGDLSSLVYRGVEYQGYGGMNSHIESGLGSSTVTIRQSGSTILVSVTYGTLRHYY
AARSGENNVYLWTNKADTSVSATRFIVRVKAGLFLNDQPDSYTYAPTTIEASDVFRKSDG
QTRSKHFSRLRVMDYDYVGWTTGSVGLWMVRSNHEKASGGPFYRSLLRHQSADGGGLYEI
LYYGQNQTEEQRFGLQGPYVIAFTDGGAPSSSLFPGTLTTSWADSLGLSGYVSASGRGRV
AGVGITGRDTAYAYTVGLANSAAQYWGSARASDGYYAISGVLPGTYTLTVFKGELAVYTT
SVTVTAGGTTTLNSIAIPSTNDPSNASAIWRINDWNGTPSGFKNADLMTYAHPSDTRAAA
WTGNVVIGSGSETSAFPCYLWKDVNSGLLVYFRLTAAQAAAAHTLRIGVTTAYANGRPQV
VVNDTWTSAIPSPPTQPNTRSLTNGSYRGNNHTFTYSVPASAWLADTSQYNVLRINVVSG
SGTTSYLSAGTSIDAIDLLN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatcccccgaccgcacgacgctcggccgacgcggcttcgtcgtcggtaccgcc
gccaccgccgccggcgccgcgctcgccgggccgctggccggcaccgcccgcgccgcgacg
ttcggctacagcgacgacggcaccaactacgtgatcgacaccggcgcgaacctggtgttc
aaggtcaggaagagcaacggcgacctgtcgtcgctggtctaccggggcgtggagtaccag
ggctacggcggcatgaactcgcacatcgagtccggcctcggcagctccaccgtcaccatc
aggcagtccggctcgacgatcctcgtctccgtcacctacggcacgctgaggcactactac
gcggcccgcagcggcgagaacaacgtctacctgtggaccaacaaggccgacacctcggtc
tccgcgacccgcttcatcgtgcgcgtgaaggcgggcctgttcctcaacgaccagcccgac
tcctacacctacgcgcccaccaccatcgaagcctcggacgtgttcaggaagtccgacggc
cagacccgctcgaagcacttctccagactccgcgtcatggactacgactacgtcggctgg
acgaccggcagcgtgggcctgtggatggtgcgcagcaaccacgagaaggcctccggcggc
cccttctaccgctccctgctgcgccaccagagcgcggacggcggcggcctctacgagatc
ctgtactacggccagaaccagaccgaggagcagcggttcggcctccagggcccgtacgtc
atcgccttcacggacggcggggcgccctcctcgtcgctgttcccgggcaccctgaccacc
tcgtgggcggactcgctcggcctgtccgggtacgtctccgcgagcggccggggccgggtg
gcgggcgtcggcatcaccgggcgcgacacggcgtacgcgtacacggtggggctcgccaac
tccgccgcgcagtactggggttcggctcgggcgtcggacggctactacgccatctccggg
gtgcttccggggacgtacacgctcacggtcttcaagggtgagctggcggtgtacacgacc
tcggtgacggtcacggcgggcgggacgacgacgctgaactcgatcgcgatcccgtccacc
aacgatccgtcgaacgcgtccgcgatctggcggatcaacgactggaacggcacgccgagc
ggattcaagaacgccgacctgatgacgtacgcgcatccgtcggacacgcgggcggccgcc
tggaccggcaatgtggtgatcggcagcggaagcgagacctcggcctttccctgctacctc
tggaaggacgtgaacagcggtctcctcgtctacttccggctgaccgccgcgcaggccgcc
gccgcccacaccctgcgcatcggggtgacgacggcctacgccaacggccggccgcaggtc
gtcgtgaacgacacctggacctcggcgatcccctccccgcccacccagccgaacacgcgg
tccctgaccaacgggtcctaccggggcaacaaccacacgttcacctacagcgtcccggcg
tccgcctggctggcggacacgagtcagtacaacgtgctgaggatcaacgtggtgagcggt
tcggggacgacctcctatctcagtgcggggacgtcgatcgacgcgatcgacctgctgaac
tga
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