Streptomyces akebiae: K1J60_10790
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Entry
K1J60_10790 CDS
T08702
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sakb
Streptomyces akebiae
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sakb03016
]
K1J60_10790
Enzymes [BR:
sakb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
K1J60_10790
Transfer RNA biogenesis [BR:
sakb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K1J60_10790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QYX76932
LinkDB
All DBs
Position
2477546..2478847
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AA seq
433 aa
AA seq
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MTDAQETAADRTLRTTGGAPPDDGGSSEAGAPIPLLEPRDGIPAVIADESSLAAVIADFA
AGSGPVAVDAERASGYRYGQRAYLVQLRREGAGTALIDPVACPDLSGLGEALSGVEWVLH
AATQDLPCLREIDMVPTRIFDTELAGRLAGFPRVGLGAMVEGVLGYVLEKGHSAVDWSTR
PLPEPWLRYAALDVELLVDLRDALEKELERQGKLEWARQEFDAIASAPPAEPRKDPWRRT
SGMHKVRRRRQMAVVREMWEARDRIARRRDVSPGKVLSDAAIVEAALALPVNAHALAALT
GFGHRMGRRQLEQWQAAVDRARALPDSALPAHGQPVTGPPPPKAWADKDPAAAARLSAAR
AGVSALAEQLTMPQENLITPDTVRRLCWEPPVTADAESISAALAGYGARAWQVELVTPVL
VGALSAAAKVKKA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagagaccgcagcagacaggaccctgcgaaccaccggaggcgcccct
ccggacgacggcggatcctctgaagcgggggcgccgatccctctgctggagccgagggac
ggaattccggccgtgatcgccgacgagtcctcgctcgccgcggtgatcgccgacttcgcc
gccggctccggccccgtcgccgtggacgccgaacgcgcgtccggttaccgctacggtcag
cgggcctatctggtgcagctgcgccgtgagggcgcgggcaccgcgctcatcgatcccgtc
gcctgcccggacctctccggcctcggcgaggcgctctccggcgtggagtgggtgctgcac
gcggccacccaggacctgccctgtctgcgcgagatagacatggtgccgacgcggatcttc
gacaccgagctggccgggcggctcgccgggttcccccgggtcggcctcggcgcgatggtc
gagggcgtgctcggctacgtcctggagaagggccactccgcggtcgactggtccacccgc
ccgctgcccgagccgtggctgcgctacgccgcgctcgacgtggagctcctcgtggacctg
cgggacgccctggagaaggagctggagcggcaggggaagctggagtgggcgcggcaggag
ttcgacgcgatcgcgtccgcgccgcccgccgaaccgcgcaaggacccgtggcggcggacg
tccgggatgcacaaggtgcggcggcgccggcagatggcggtcgtgcgcgagatgtgggag
gcgcgggaccgcatcgcccggcggcgggacgtgtcgccggggaaggtgctgagcgacgcg
gcgatcgtggaggcggccctggccctgccggtcaacgcgcacgcgctggccgcgctgacc
gggttcgggcatcggatgggacggcggcagctggagcagtggcaggccgcggtggaccgg
gccagggccctgccggactccgcgctgccggcgcacgggcagccggtgacgggcccgccg
ccgccgaaggcgtgggccgacaaggatccggcggcggcggcgcggctgtccgcggcgcgg
gccggggtgtccgcgctggcggagcagctcaccatgccgcaggagaatctgatcactccg
gacaccgttcggcggttgtgctgggagccgccggtcacggccgacgccgagtcgatctcc
gctgcgctggccgggtacggggcgcgggcctggcaggtggagctggtcacaccggttctg
gtgggggcgctgtccgccgcggcgaaggtgaagaaggcatag
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