Streptomyces akebiae: K1J60_12060
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Entry
K1J60_12060 CDS
T08702
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sakb
Streptomyces akebiae
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sakb03009
]
K1J60_12060 (rimO)
Enzymes [BR:
sakb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K1J60_12060 (rimO)
Ribosome biogenesis [BR:
sakb03009
]
Prokaryotic type
ribosomal protein modification factors
K1J60_12060 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QYX77162
LinkDB
All DBs
Position
complement(2820444..2821925)
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AA seq
493 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWELVEDAEEADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAQRQESAAEVALPGHAPVDLPEGLAPASGPRSPLRRRLD
GSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEVMLVSENNT
SYGKDLGDIRLLESLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVVPYFDLSF
QHSAPAVLRSMRRFGDTDRFLELLDTIRGKAPEAGVRSNFIVGFPGETEDDLAELERFLN
GARLDAIGVFGYSDEEGTEAATYENKLSEDVVSERLARVSRLAEELVSQRAEERVGQTVR
VLVESVDGDEGAYGRAAHQAPETDGQVLFTNGQELSVGLMVEAKVVGTEGVDLVAEVLPG
SLASPTCTEEAAR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactcgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggaggcggacggctgggagctcgtcgaggacgccgag
gaagcggacgtcgcggtcgtcaacacctgtggcttcgtcgaggccgccaagaaggactcc
gtcgacgccctcctggaggccaacgacctcaagggccacggcagaacccaggccgtcgtg
gcggtgggctgcatggcggagcggtacggcaaggaactggccgaggcgctgcccgaggcc
gacggcgtgctcggcttcgacgactacgccgacatctccgaccgtctccagaccatcctc
aacggcggtatccacgcgtcgcacaccccgcgcgaccggcgcaagctgctgccgatcagc
ccggcccagcggcaggagtccgcggccgaggtcgcgcttccggggcacgcccccgtcgat
cttccggaaggtctcgctccggcttcggggccgcgttccccgctgcgccgccgtctggac
ggctcacccgtcgcctccgtgaagctcgcctccggctgcgaccgccgctgctcgttctgc
gccattccctcattccgcggctccttcatctcgcgccgtccctcggacgtgctgaacgag
acgcgctggctggccgagcagggtgtcaaggaggtcatgctggtctccgagaacaacacc
tcctacggcaaggacctgggcgacatcaggctgctggagtccctgctgcccgagctcgcc
gaggtcgacggcatcgagcgggtgcgcgtcagctacctccagcccgccgagatgcggccc
ggcctcatcgacgtgctcacctccacgcccaaggtcgttccgtacttcgacctctccttc
cagcactccgcccccgcggtgctgcgctcgatgcgccgcttcggcgacaccgaccgcttc
ctggagctgctggacaccatccgcggcaaggcccccgaggccggcgtccggtccaacttc
atcgtgggcttccccggtgagaccgaggacgatctcgcggagctggaacggttcctgaac
ggcgcgagactggacgccatcggtgtcttcgggtactccgacgaggagggcaccgaagcg
gcgacgtacgagaacaagctgtccgaggacgtcgtctccgagcggctcgcgcgggtctcg
cgactggccgaggaactggtctcgcagcgcgccgaggaacgcgtcggacagaccgtgcgc
gtgctggtcgagtcggtcgacggcgacgagggtgcgtacggccgtgccgcgcaccaggcg
cccgagaccgacggtcaggtgctgttcacgaacggccaggaactgagcgtcggtcttatg
gtcgaggcgaaggtggtcggcacggaaggcgtcgacctggtggccgaggtgcttccgggc
tcgctcgcctcccccacgtgtactgaggaggcggccagatga
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