Streptomyces akebiae: K1J60_12825
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Entry
K1J60_12825 CDS
T08702
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sakb
Streptomyces akebiae
Pathway
sakb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K1J60_12825 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sakb03400
]
K1J60_12825 (mutM)
Enzymes [BR:
sakb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K1J60_12825 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K1J60_12825 (mutM)
DNA repair and recombination proteins [BR:
sakb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K1J60_12825 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
DUF7573
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QYX77296
LinkDB
All DBs
Position
complement(3021324..3022184)
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AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLERWVAHRTVAEVEVLHPRAIRRHLAGPEDFAHRLKGRRIGEPSRRG
KYLWLPVEDTGIAVLAHLGMSGQLLVQPHDAVDEKHLRIRVRFADDLATELRFVDQRTFG
GLSLHDTTPDGLPDVIAHIARDPLDPQFDAEAFHQALRRKRTTIKRALLDQSLISGVGNI
YADEALWRARIHYERPTAGFTRPRTTELLGHVRDVMNAALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREGLPCRRCATPMRRRPWMNRSSYFCPTCQRAPRVAS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaacttcccgaggtcgaggtcgtccggcgcggactggagcgctgggtggctcac
cggacggtcgccgaggtcgaggtgctccacccccgggcgatccgccggcacctggccggt
cccgaggacttcgcgcaccggctcaagggccgccgcatcggcgagcccagccggcgcggg
aagtatctgtggctgcccgtggaggacaccgggatcgccgttctcgcgcacctcggcatg
agcggtcagctgctcgtgcagccgcacgacgcggtcgacgagaagcacctcaggatccgt
gtccgcttcgcggacgacctcgccaccgaactgcgcttcgtcgaccaacgcaccttcggc
ggactgtcgttgcacgacaccacccccgacggtctgccggacgtcatcgcgcacatcgcc
cgtgaccccctcgacccgcagttcgacgccgaggccttccaccaggcgctgcggcggaag
cgtacgacgatcaaacgcgccctgctggaccagtcgttgatcagcggggtcggcaacatc
tacgcggacgaggcgctctggcgggcgaggatccactacgagcgccccacggccggtttc
acccgcccccgcaccaccgaactcctgggccacgtacgggacgtgatgaacgcggccctc
gcggtgggcggcacgagcttcgacagcctctacgtcaacgtgaacggtgagtcggggtac
ttcgaccggtcgctggacgcgtacggccgtgaggggctgccctgccgccgctgtgccaca
ccgatgcggcggcggccgtggatgaaccggtccagctacttctgcccgacgtgtcagcgg
gcgccgcgcgtcgcgtcgtag
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