Streptomyces akebiae: K1J60_12935
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Entry
K1J60_12935 CDS
T08702
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sakb
Streptomyces akebiae
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sakb03032
]
K1J60_12935
03036 Chromosome and associated proteins [BR:
sakb03036
]
K1J60_12935
03400 DNA repair and recombination proteins [BR:
sakb03400
]
K1J60_12935
DNA replication proteins [BR:
sakb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K1J60_12935
Chromosome and associated proteins [BR:
sakb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
K1J60_12935
DNA repair and recombination proteins [BR:
sakb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
K1J60_12935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
QYX77312
LinkDB
All DBs
Position
complement(3044776..3045426)
Genome browser
AA seq
216 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAADAVDAVLDAIVRAVVGGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVAVKKAPKGSLSGGASATVKK
AAAKKTAAKKTTARKTTAAAKKTTAAAKKTTAKKTTAKKATTKTAAAKKTTAKTTAAAKK
TAAKKAPAKKATAKKAPAKKSTARKTTAKKTAARQA
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgcggacaaggtcggcgggcgtcagcaggcc
gccgacgcggtcgacgctgttctggacgccatcgtccgcgcggtcgtcggcggggaccgg
gtgtcggtcaccggcttcggttcgttcgagaaggtcgaccggccggcccgttacgcccgc
aacccgcagacgggtgagcgggttcgggtcaagaagacctccgtgccgcggttccgcgcg
ggccagggcttcaaggacctggtgagcggctcgaagaagcttccccgtggtggcgaggtc
gcggtcaagaaggcgcccaagggcagcctgagcggtggggcttcggcgacggtcaagaag
gcggcggcgaagaagaccgccgcgaagaagacgaccgcccgcaagaccacggccgccgcc
aagaagacgacggccgccgcgaagaagaccacggcgaagaagacgaccgccaagaaggcc
accacgaagacggcggcggcgaagaagaccaccgccaagacgacggccgcggcgaagaag
accgcggcgaagaaggccccggccaagaaggccaccgcgaagaaggcgccggccaagaag
tcgacggctcgcaagacgaccgcgaagaagaccgccgcgcgtcaggcctag
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