Streptomyces akebiae: K1J60_14910
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Entry
K1J60_14910 CDS
T08702
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sakb
Streptomyces akebiae
Pathway
sakb03420
Nucleotide excision repair
sakb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K1J60_14910
03430 Mismatch repair
K1J60_14910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sakb03400
]
K1J60_14910
Enzymes [BR:
sakb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K1J60_14910
DNA repair and recombination proteins [BR:
sakb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K1J60_14910
MMR (mismatch excision repair)
Other MMR factors
K1J60_14910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QYX77650
LinkDB
All DBs
Position
complement(3488709..3492146)
Genome browser
AA seq
1145 aa
AA seq
DB search
MSARISDPEQLKELLGIPFTPEQTACIVAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALVRAGITDPDVIDPDNPPGEPVISTYHAFAGRLL
TDHGLRVGLEPTARLLADATRYQLAARVLRESPGPYPALTRSFPDLVSDLLTLDSELAEH
LVRPEDLRAYDAELLRELEGAKLTNADLRKVPEAAAARRELTELVGRYRAAKRERDLLDF
GDQIALSAGLARLPEVGRILRDEFRVVLLDEYQDTSVAQRVLLAGLFGGGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPEHFAHPDGRPAARQALSENRRSGGRLLDLANGLAEPLRAM
HAGVEALRPAPGAERDGVVRCALLNTHAEELDWLADAIAHLVRTGKEPGEIAVLCRTAGD
FAEIQGALVARDIPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLTGPRWRIG
PRDLALLGRRARLLVSHARVDGDADPDRRLAAAVEGVDPSEVISLADALDTFLELPLEAG
GEDDGLPFSPDARVRFARLAAELRDLRRSLADPLMDVLHRVLAVTGLEVELSASPHALAA
RRRETLSNFLDVAASFAANSAGEATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAH
KSKGLEWDVVAVPGLVTGTFPSTQGREKWTAQGKVLPHELRGDADTLPDVEAWDSRGLKA
FQEAMKDHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKRPRGPSDFLKALYDHCVAGH
GEIEAWADEPEGDAENPALHERAADHAWPLPLDATALMRRRAAARTVLAHLDAAAGHDDT
RPGTADEDFADDPSADEDTDDWDSWSSDRPAQGPHARVQPPAPAELAPAVPHARRHPSAS
ALTPEESRTVASWDRDLDALTGELMRARAKVTDVPLPASLTTSQLMRLAADPDGFAQELA
RPMPRPPQPAARRGTRFHAWLEARFEELRLPMLEPEELPGSEAEIADELDLEALKEAFER
TPYAHRTPHRVEAPFQIDIAGRVVRGRIDAVYRTDDGDGTTTYEIVDWKTSRTRAADPLQ
LAVYRLAWAEQHGVPLESVDAVFLHVRTGDVVRPANLPGRDALVRLLMEEPGTGEEPDSS
TEWPE
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccgtatcagcgatcccgagcagctcaaggagctcctgggcattccgttcacc
ccggagcagacggcctgcatcgtcgcgccgcccgctccgcaggtgatcgttgccggagcg
gggtcgggcaagaccaccgtgatggccgcgcgcgtggtgtggctggtcggtaccggacag
gtcgcccccgaacaggtgctcggcctgaccttcaccaacaaggcggcgggcgaactcgcc
gagcgcgtacgcaaggccctggtcagagcgggcatcaccgacccggacgtgatcgacccg
gacaacccgccgggggaaccggtcatctccacgtaccacgccttcgcgggccgcctgctg
accgaccacggactgcgcgtcggcctggagcccaccgcgcggctcctggccgacgccacc
cgctaccagctcgccgcgcgggtcctgagggagtccccgggcccctacccggcgctgacc
cgctccttccccgatctcgtcagcgacctcctgaccctcgattccgaactcgccgagcac
ctcgtacgccccgaggacctacgcgcgtacgacgccgaactgctgcgcgaactggagggt
gcgaagctcaccaacgcggatctgcgcaaggtccccgaggcggccgccgcccgacgcgaa
ctcaccgaactggtcggccgctaccgcgcggccaagcgcgagcgggacctcctcgacttc
ggcgaccagatcgccctgtccgccggcctcgcccgactccccgaggtggggcgcatcctg
cgggacgagttccgagtggtcctgctcgacgagtaccaggacacctcggtcgcccaacgt
gtcctgctggcaggtctgttcggcggcggcaccggtcatcccgtgaccgccgtgggcgac
ccctgccaagccatctacggctggcgcggcgcctccgtcgccaacctcgatgatttcccg
gagcacttcgcccaccccgacggccgccccgcggctcgccaggcgctcagcgagaaccgc
cgcagcggcggccgtcttctcgacctcgccaacggtctcgcagagcccctgcgggccatg
cacgcgggcgtggaggccctccgccccgctcccggcgccgaacgcgacggtgtggtccgc
tgcgccctcctgaacacgcacgccgaggaactggactggctcgccgacgcgatcgcccac
ctggtgcgcacaggaaaggaacccggtgagatcgcggtcctgtgccgcaccgccggcgac
ttcgccgagatccagggcgccctcgtcgcccgggacatcccggtagaggtggtcggcctc
tccgggctgctccacctccccgaggtcgccgacctggtagctgtctgcgaggttctccag
gacccgggcgccaacgcttctctcgtccgcctcctcaccggcccgcgctggcggatcggc
ccccgcgacctcgcccttctggggcgccgcgccaggctgctcgtgtcccacgcgcgcgtg
gacggcgacgccgacccggaccgccggctcgccgcggccgtcgagggcgtcgacccgtcc
gaggtgatctcgctcgcggacgcgctggacacgttcctggaactccccctggaagccggg
ggggaggacgacgggctgccgttctcgccggacgcgcgcgtccgcttcgcccggctcgcc
gccgaactgcgtgacctgcgccgctcgctcgcggacccgctcatggacgtcctccaccgc
gtcctcgccgtcaccggcttggaggtggaactctcagcgtccccccacgcgctcgccgcc
cgtcgccgcgagaccctgtccaacttcctggacgtcgccgcctccttcgccgccaacagc
gcgggagaggccaccctgctcgccttcctcggattcctgcgtacggccgcccagtacgag
aagggcctcgacaacgccctgccgggcggagagaacaccgtcaaggtcctcaccgcccac
aagtccaagggcctggagtgggacgtcgtcgccgtccccggcctggtcaccggtaccttc
cccagcacccagggccgcgagaagtggaccgcccagggcaaggtcctgccgcacgagctg
cgcggcgacgccgacaccctccccgacgtcgaggcctgggactcgcgcggcctgaaggcc
ttccaggaggccatgaaggaccaccagcacaccgaggaactccgcctcggctacgtcacg
ttcacccggccccgctccctgctcctcggctccggccactggtggggcccgtcccagaaa
cgcccgcgcgggccgtccgacttcctcaaggccctgtacgaccactgcgtcgccgggcac
ggcgagatcgaagcctgggccgacgagccggagggggacgcggagaaccccgccctccac
gagagggcggccgaccacgcctggccgcttccgctcgacgccacggccctgatgcgccgc
cgcgcggcggcccgcaccgtactggcccacctggacgcggccgccggccacgacgacacg
cgtccgggtaccgctgacgaggacttcgcggacgacccctcggccgacgaggacaccgac
gactgggactcctggtcgtcggaccgccccgcgcagggcccccatgcgcgcgtgcagcct
cccgcaccggccgagctcgcaccggccgtgccgcacgcccgcagacacccctccgcctcc
gcactcacccccgaggagtcccgcaccgtcgcctcatgggaccgcgacctggacgccctc
accggagagctcatgcgagcccgcgcgaaggtcaccgacgtacccctgccggcgtccctg
accacctcgcagctgatgcgtctggccgccgacccggacggcttcgcgcaggagctcgcc
cgccccatgccgcgccccccgcagcccgcggcacgccgcggcacccgtttccacgcctgg
ctcgaagcccgtttcgaggaacttaggctgcccatgctggagcccgaggaactgcccggc
agcgaggccgagatcgccgacgaactggacctggaggccctcaaggaggcattcgaacgc
acgccgtacgcgcaccgcaccccccaccgggtcgaggcacccttccagatcgacatcgcc
ggccgtgtcgtacgcggccgcatcgacgccgtctaccggaccgacgacggcgacgggacg
acgacgtacgagatcgtcgactggaagaccagccgcacccgcgccgccgacccgctccag
ctcgccgtctaccgactggcctgggccgagcagcacggcgtgcccctggagtccgtcgac
gcggtcttcctgcacgtccgcacaggggacgtcgtacgacccgcgaacctccccggccgg
gacgctctggtgcgactgctcatggaggaacccggtaccggagaggaaccggattcgagc
acggagtggccggagtga
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