Streptomyces akebiae: K1J60_16720
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Entry
K1J60_16720 CDS
T08702
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sakb
Streptomyces akebiae
Pathway
sakb03420
Nucleotide excision repair
sakb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K1J60_16720 (pcrA)
03430 Mismatch repair
K1J60_16720 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sakb03400
]
K1J60_16720 (pcrA)
Enzymes [BR:
sakb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K1J60_16720 (pcrA)
DNA repair and recombination proteins [BR:
sakb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K1J60_16720 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
K1J60_16720 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QYX77958
LinkDB
All DBs
Position
complement(3913301..3915817)
Genome browser
AA seq
838 aa
AA seq
DB search
MSSLFDDSFLADLQAPRGHAEEPPPPPEDDHVPEPLPDDLFGGKFDVPPDRDAYYRGGAP
RPALDAAALLDGLNENQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAHLLGERHVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAL
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGTSEHPVDVPPAEWDVPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPNATTILLEQ
NYRSTQTILSAANAVIERNESRRPKNLWTNAGAGAQITGYVADTEHDEAQFVADEIDRLT
DAGDAKAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLAN
PEDSVPLRRILNVPKRGIGDRAEAMIDALSQREKISFPQALKRVDEAYGMAARSTNAVKR
FNTLMEDLRTVVESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEF
EQEAGAGEGETEGEAAGTTSAGLSDFLERVALVADSDQIPDEEEDGSGVITLMTLHTAKG
LEFPVVFLTGMEDGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSSLRSAWGQP
SYNPPSRFLEEIPASHLEWKRTGASAPVSSGPAGGIAASLSSSRSRSSASGASGFATRRG
NEKPVVSLAVGDRVTHDQFGLGTVVGVGGSGANAEATIDFGDTKPKRLLLRYAPVEKL
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctccaggccccccgcggccacgcg
gaggagcccccgccgccgcccgaggacgatcacgtaccggagccgcttccggacgatctg
ttcggcgggaagttcgacgtgccaccggaccgggacgcctactaccggggcggtgccccc
cgcccggctctcgacgcggcggccctcctggacgggctgaacgagaaccagcgcgcggcc
gtggtgcacgccgggtcacctctgctcatcgtcgccggcgccggttccggcaagacccgg
gtgctcacccaccgcatcgcccacctgctcggcgagcgccatgtccacccgggccagatc
ctcgcgatcaccttcaccaacaaggccgccggtgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgcgaacgcgatgtgggtcatgaccttccacagcgcgtgcgtccggatc
ctgcggcgcgagtcgaagaagctcggcttcacgtcctccttctcgatctacgacgccgcc
gacagcaagcggctgatggcgctcgtctgccgtgatctggacctcgacccgaagcgcttc
ccgcccaagtccttcagcgccaagatctcgaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccgccgacggcttcgagaagaccctcgcccaggcctacgcgctc
taccagtcccgcctccgcgaggcgaacgcactcgacttcgacgacctgatcatgacgacg
gtcaatctgctgcgcgccttcccggacgtcgccgagcactaccgccgtcgcttccgtcat
gtcctcgtcgacgagtaccaggacaccaatcacgcccagtacgccctggtcagagagctg
gtcggcacctccgagcacccggtggacgtgccgccggccgagtgggacgtacctccggcc
gagctctgcgtcgtgggtgacgcggaccagtcgatctacgccttccgcggcgcgaccatc
cgcaacatcctccagttcgaggaggactacccgaacgcgaccacgatcctgctggagcag
aactaccgctccacgcagaccatcctgagcgcggccaacgcggtcatcgagcgcaacgag
tcccgccgcccgaagaacctgtggaccaacgccggcgcgggcgcgcagatcaccggttac
gtcgccgacaccgagcacgacgaggcccagttcgtcgccgacgagatagaccgcctgacg
gacgcgggcgacgcgaaagccggcgacgtcgccgtcttctaccggacgaacgcccagtcc
cgagtcttcgaagaggtgttcatccgcgtcggcctgccctacaaggtcgtcggcggcgtc
cgcttctacgagcgcaaggaggtccgggacgtcctcgcgtatctgcgggtcctcgccaac
ccggaggactccgtcccgctgcgccgcatcctcaacgtgcccaagcgcggcatcggcgac
cgcgccgaggcgatgatcgacgccctctcccagcgcgagaagatcagcttcccccaggcg
ctgaagcgcgtggacgaggcgtacggcatggcggcccggtcgaccaacgcggtcaagcgg
ttcaacacgctgatggaggacctgcggaccgtcgtcgagtccggcgccggaccggccacc
gtcctggaagcggtcctcgaacggacgggctatctggccgaattgcaggcctccaccgac
ccgcaggacgagacccgcatcgagaacctccaggaactcgccgccgtcgccctggagttc
gagcaggaggccggtgccggagagggagagaccgagggcgaggcggcgggtacgacatcc
gccgggctctccgacttcctggagcgggtggcgctggtcgccgactccgaccagatcccc
gacgaggaggaggacggctcgggcgtgatcacgctcatgaccctccacaccgccaagggc
ctggagttcccggtggtcttcctcaccggcatggaggacggcgtcttcccgcacatgcgc
gccctgggccagaccaaggagttggaggaggagcgtcgcctcgcgtacgtgggcatcacc
cgcgcacgtgaacggctctacctcacccggtcgtcgctgcgcagcgcctggggtcagcct
tcgtacaacccgccgtcccggttcctggaggagatcccggcctcccatctggagtggaag
cgcacgggcgcctccgcgccggtgtcctcgggcccggccggcgggatcgcggcctcactg
tcgtcctcccgctcccggtcctcggcctccggcgcgtccggcttcgcgacccgccgcggc
aacgagaagccggtggtctccctcgccgtgggcgaccgcgtcacccacgaccagttcggc
ctcggcacggtcgtcggcgtcgggggttcgggagcgaacgcggaggcgacgatcgacttc
ggcgacaccaagccgaagcgcctgctgctgcggtacgcgccggtggagaagctgtag
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