Streptomyces akebiae: K1J60_19120
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Entry
K1J60_19120 CDS
T08702
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sakb
Streptomyces akebiae
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sakb03032
]
K1J60_19120 (topA)
03400 DNA repair and recombination proteins [BR:
sakb03400
]
K1J60_19120 (topA)
Enzymes [BR:
sakb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K1J60_19120 (topA)
DNA replication proteins [BR:
sakb03032
]
Prokaryotic type
DNA Topoisomerases
K1J60_19120 (topA)
DNA repair and recombination proteins [BR:
sakb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K1J60_19120 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QYX78379
LinkDB
All DBs
Position
complement(4452733..4455567)
Genome browser
AA seq
944 aa
AA seq
DB search
MSPTSETAKGGRRLVIVESPAKAKTIKGYLGPGYIVEASVGHIRDLPNGAAEVPEQYTGE
VRRLGVDVEHDFAPIYVVNADKKAQVRKLKDLLKESDELFLATDEDREGEAIAWHLQEVL
KPKVPVKRMVFHEITKAAIQAAVANPRELNQRLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFATGRAGDASDPSSLVARLQSVD
GRRVAQGRDFDSLGQIKGANVLHLDEANARALAAALENTRFAVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSDTAVAAARAQVTQLYGG
DYLPAQPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQMK
DATGNSVTVKIGGTASDGRDAEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
NQGDPLSAEEITVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEAQAVPWLKRFYFGEGP
GSGGTAAEAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGSGIVLRVGRYGPYIERGEK
DAEGHQRADIPEDLAPDELSVELAEELLAKPSGDFELGADPATGHQIVAKDGRYGPYVTE
ILPEGTPKTGKNAVKPRTASLFKSMTLDTVTLDDALKLMSLPRVVGADAEGQEITAQNGR
YGPYLKKGTDSRSLQSEEQLFTITLEEALQIYAQPKQRGRAAAKPPLKELGEDPVSGKPV
VVKDGRFGPYVTDGETNATLRSGDSVEEITPERGFELLAEKRAKAPAKKTAKKAPAKKTA
TKKAAPAKKTAAKKTTASKTAVAKKAAPAKKAAAKKATSAGESA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcgaagggcggccgccgactcgtgatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctatctcggccccggctacatcgtcgaggcgagcgtg
gggcacatccgcgaccttccgaacggcgccgcggaggtgcccgagcagtacaccggcgag
gtgcgccgcctcggcgtggacgtcgagcatgacttcgcgcccatctacgtcgtcaacgcg
gacaagaaggcccaggtcaggaagctcaaggacctgctgaaggagtccgacgaactcttc
ctcgccaccgatgaggaccgcgagggcgaggccatcgcctggcacctccaggaggtgctc
aagcccaaggtcccggtcaagcggatggtcttccacgagatcaccaaggccgcgatccag
gccgccgtcgccaacccgcgcgagctgaaccagcgcctcgtcgacgcccaggagacccgc
cgcatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccgcgcctgtcggcgggccgcgtccagtccgtcgcgacgcggctcgtcgtggagcgggag
cgggagcggatcgccttccgctcggccgagtactgggacctgaccggtaccttcgcgacc
ggccgcgccggtgacgcctccgacccgtcgtcgctggtcgcacgcctgcagtcggtggac
ggccgccgcgtcgcccagggccgcgacttcgactcgctggggcagatcaagggcgcgaac
gtcctccacctcgacgaggcgaacgcccgagcgctcgccgccgccctggagaacacccgg
ttcgcggtccggtccgtcgagtccaagccgtaccgccgctcgccgtacgcccccttccgt
acgacgacgctccagcaggaggcctcgcgcaagctcggcttcggggcgaaggcgacgatg
caggtggcgcagaagctgtacgagaacggcttcatcacctacatgcgtacggactccacg
acgctcagcgacaccgccgtggccgccgcccgcgcccaggtcacccagctgtacggcggc
gactacctgccggcgcagccgcgtacgtacgccgggaaggtcaagaacgcgcaggaggcg
cacgaggcgatccgcccctcgggtgatcgtttccgcacgcccgccgagaccgggctgacc
ggtgaccagttcaagctgtacgagttgatctggaagcggaccgtcgcctcccagatgaag
gacgccacgggcaacagcgtcaccgtcaagatcggtggcaccgcctccgacggccgggac
gccgagttcagcgcctccggaaagacgatcaccttccacggcttcctcaaggcctacgtc
gagggcgccgacgacccgaacgccgagctcgacgaccgtgagcgtcggctgccgcaggtc
aaccagggcgacccgctctccgccgaggagatcacggtcgacgggcacgccaccaagccc
ccggcccgctacaccgaggcgtcgctggtcaaggagctcgaagaacgcgagatcggccgc
ccgtcgacgtacgcgtcgatcatcggcaccatcctcgaccggggctatgtgttcaagaag
ggcacggcgctcgtgccgtccttcctgagcttcgccgtggtcaacctcctggagaagcac
ttcgggcggctcgtcgactacgacttcaccgccaagatggaggacgacctcgaccgcatc
gcgcgcggcgaggcccaggcggtgccgtggctgaagcggttctacttcggcgagggcccg
ggctccggcggcacggcggccgaggccggcaacggcgacggcgaccacctcggtggactc
aaggaactggtgaccgacctgggcgcgatcgacgcgcgcgaggtgtcgtcgttccccgtc
ggcagcggcatcgtgctgcgcgtcgggcgttacggcccgtacatcgagcgtggggagaag
gacgccgaggggcaccagcgcgccgacatccccgaggacctggccccggacgagctgagc
gtcgaactggcggaggaactgctggccaagcccagcggcgacttcgaactgggcgcggac
ccggcgaccggccaccagatcgtcgccaaggacgggcgctacgggccgtacgtcacggag
atcctgcccgagggcacgccgaagacgggcaagaacgccgtcaagccgcgtacggcctcg
ctgttcaagtcgatgaccctggacacggtcaccctggacgacgcgttgaagctgatgtcg
ctgccgcgcgtggtcggtgccgacgcggagggccaggagatcaccgcgcagaacgggcgg
tacgggccgtatctgaagaagggcacggactcgcgttcgctgcagtccgaggagcagctc
ttcacgatcactctcgaagaggcgctgcagatctacgcccagcccaagcagcgggggcgg
gccgccgccaagccgccgctgaaggaactgggcgaggaccccgtcagcgggaagccggtc
gtggtgaaggacggccgtttcgggccgtacgtcaccgatggcgagaccaacgcgaccctg
cggtccggggacagcgtggaggagatcacgcccgagcgcggcttcgaactgctggcggag
aagcgggcgaaggcgcccgccaagaagacggccaagaaggcgccggcgaagaagacggcg
accaagaaggccgcgccggcgaagaagaccgccgccaagaagaccaccgcttcgaagacg
gccgtggccaagaaggcggctcccgcgaagaaggcggcagcgaagaaggcgacgtcggca
ggggagagcgcctaa
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