Streptomyces akebiae: K1J60_22540
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Entry
K1J60_22540 CDS
T08702
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sakb
Streptomyces akebiae
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sakb03021
]
K1J60_22540
Transcription machinery [BR:
sakb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K1J60_22540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
MarR_2
NirdL-like_HTH
MarR
HTH_3
DUF7343
DUF134
Motif
Other DBs
NCBI-ProteinID:
QYX78937
LinkDB
All DBs
Position
complement(5249554..5250441)
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AA seq
295 aa
AA seq
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MDEEVALTVSASTAPPQEDVPAPDAAPAQVTAQVTAPAPEKRRGADTRALTQLLFGELKH
LAPGTPEHNRVRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRG
VQFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQVNSATEDLTTAFGRTPSTAEIA
ERLRITEEEVLSCIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPELDGVEHRDLVRHL
LVQLPEREQRILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaggtggcgttgaccgtgtcggccagtactgcgcctccccaggaagacgtc
cccgctcccgatgccgcaccggcccaggtcacagcccaggtcacggcccccgccccggag
aaacgtcgcggcgccgacacccgggccctcacccagctcctgttcggcgagctgaagcat
ctggcgccgggcactccggagcacaaccgcgtgcgcggggcgctcatcgaggcgaacctc
ccgctcgtgcgctacgcggccgcccgcttccgctcccgcaacgaacccatggaggacgtg
gtccaggtcggcaccatcggactcatcaacgccatcgaccgcttcgacccggaccgtggt
gtgcagttcccgaccttcgccatgccgaccgtcgtcggggagatcaagcggtacttccgc
gacaacgtccgcacggtccacgtcccgcgccggctgcacgagttgtgggtccaggtgaac
agcgcgaccgaggacctcaccaccgccttcggccgcaccccctccaccgcggagatcgcc
gagcggctgcgcatcaccgaggaggaggtcctgtcctgcatcgaggcgggccgctcgtac
cacgcgacctcgctggaggccgcccaggagggcgacgggctaccgggcctgctcgaccgg
ctcggctacgaggaccccgaactcgacggcgtcgaacaccgcgacctcgtacggcatctc
ctcgtccaactccccgaacgcgagcagcggatcctgctgctccgctactacagcaacctc
acgcagtcgcagatcagcgcggagctgggggtctcccagatgcatgtgtcgcgactgctg
gcccggagcttcgcgcggttgcggtcggccaaccgaatcgaggcgtag
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