Streptomyces akebiae: K1J60_24500
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Entry
K1J60_24500 CDS
T08702
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sakb
Streptomyces akebiae
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sakb03016
]
K1J60_24500 (thpR)
Enzymes [BR:
sakb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
K1J60_24500 (thpR)
Transfer RNA biogenesis [BR:
sakb03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
K1J60_24500 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
aGPT-Pplase3
Motif
Other DBs
NCBI-ProteinID:
QYX83166
UniProt:
A0ABX8Y6Y9
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All DBs
Position
5669297..5669869
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AA seq
190 aa
AA seq
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MRLFAAVLPPDEVVDELGLVVGELKRLAGADRLRWTAPPGWHFTLAFYGEVEEDVVPELS
RRLERAAGRSEPFRLAVRGGGRFGHGRALWAGAEGDVGALRMLADRAEAAARKAGVPMGE
HRRYTPHLTVARSRVDLDVRPYVAVLDAFAGSPWTVSELALVRSDLPTSGVAGEQPRYEA
VARWGLGAAG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgcggctgttcgccgcggtgttgccgcccgatgaggtggtcgatgaactcggcctggtg
gtcggggagttgaaacggctggccggtgcggaccggttgcggtggaccgcgccgcccggc
tggcacttcacgctcgccttctacggggaggtcgaggaggacgtcgtcccggagctgtcg
cggcggctggagcgtgccgcgggccggagcgagccgttccggctggcggtgcgcggtggc
ggccggttcgggcacgggcgggcgctgtgggcgggggccgagggggacgtcggcgcgctg
cggatgctggccgaccgggcggaggcggcggcgcggaaggccggggtgccgatgggggag
caccgccggtacacgccccatctgacggtggcccgcagccgggtggatctcgacgtacgg
ccgtacgtcgccgtgctcgacgccttcgccgggagtccgtggacggtgtccgagctggcg
ttggtgcgcagcgatctgccgacgtccggggtggcgggtgagcagccgcggtacgaggcg
gtggcgcggtgggggctcggggcggccggatga
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