Streptomyces akebiae: K1J60_28460
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Entry
K1J60_28460 CDS
T08702
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sakb
Streptomyces akebiae
Pathway
sakb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K1J60_28460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sakb03400
]
K1J60_28460
Enzymes [BR:
sakb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K1J60_28460
DNA repair and recombination proteins [BR:
sakb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K1J60_28460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
HHH_5
PIF1
NAT10_TcmA_helicase
NPHP3_N
TraI_hel_assoc_N
AAA_16
PhoH
nSTAND3
DEAD
HTH_IclR
AAA
ABC_tran
TrwB_AAD_bind
SLFN-g3_helicase
DUF87
UvrD_C
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QYX79934
UniProt:
A0ABX8XW88
LinkDB
All DBs
Position
6589849..6592110
Genome browser
AA seq
753 aa
AA seq
DB search
MAQQAGNPPGERQLAVLEGVLERITYANEDNGYTVARVDTGRGGGDLLTVVGALLGAQVG
ESLRMEGRWGSHPQYGKQFTVENYTTVLPATVQGIRRYLGSGLVKGIGPIFADRITQHFG
LDTLQIIEEEPKRLIEVPGLGPKRTKKIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIYK
KYGDASIGVVKNQPYRLASDVWGIGFLTADKIAQSVGIPHDSPERVKAGLQYALSQATDQ
GNCYLPEERLIADAVKLLQVDTGLVIECLAELALPDEESGDPGVVREKVPGPDPGSEPVT
AIYLVPFHRAELSLSAQLLRLLRTDQDRMPGFHDVAWDKALAWLKGRTGTELAPEQEAAV
RLALTKKVAVLTGGPGCGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLAELTGAEAST
VHRLLELKPGGDAAYDKDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQ
LPSVGAGEVLRDLLADGSPVPAVRLTKVFRQAQQSGVVTNAHRINSGQHPVTDGMKDFFL
FVEDDTEEAGRLTVDVAARRIPARFGLDPRRDVQVLAPMHRGPAGAGNLNGLLQQAITPA
RPDLAEKRFGGRVFRVGDKVTQIRNNYEKGENGVFNGTVGVVTALDPVDQRLTVLTDEDE
EVAYEFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKKLVV
LVGSRKAIGQAVRTVSAGRRCTALDFRLAPRSL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacaggcggggaaccccccgggcgaacgacagctcgccgtactcgaaggcgtc
ctggaacgcatcacgtacgccaacgaggacaacggctacacggtcgcgcgcgtggacacc
ggccggggcggcggcgatctgctcacggtcgtcggcgcgctgctcggcgcccaggtcggc
gaatccctccgcatggagggccgttggggctcccacccgcagtacggcaagcagttcacc
gtcgagaactacacgaccgtcctcccggccaccgtccagggcatccgccgctacctcggc
tccggcctggtcaagggcatcggcccgatcttcgccgaccgcatcacccagcacttcggc
ctggacaccctccagatcatcgaggaggagccgaagcgcctcatcgaggtccccggcctc
ggccccaaacgcaccaagaagatcgccgacgcctgggaggaacagaaggcgatcaaggag
gtcatgctcttcctccagacggtcgaggtgtccacgtccatcgccgtgcgcatctacaag
aagtacggcgacgcctcgatcggggtcgtgaagaaccagccgtaccgcctcgcctccgac
gtctggggcatcggcttcctcaccgccgacaagatcgcccagtccgtcggcatcccccac
gacagcccggagcgcgtcaaggcgggcctgcagtacgccctttcgcaggccaccgaccag
ggcaactgctatctcccggaggagcgcctgatcgccgacgcggtcaagctcctccaggtc
gacacgggcctggtcatcgagtgcctggccgaactcgccctgccggacgaggaatcgggc
gaccccggcgtcgtacgcgagaaggtccccggccccgaccccggctcggagccggtcacc
gccatctacctcgtccccttccaccgcgccgaactctccctctccgcccagctgttgcgc
ctcctgcgcacggaccaggaccgtatgcccggcttccacgacgtggcctgggacaaggcg
ctggcctggctgaaggggcgtacgggcacggagctggccccggagcaggaggctgccgta
cgcctcgcgctgacgaagaaggtggccgtgctcaccggcggtcccggctgcggcaagtcc
ttcacggtccgttcgatcgtcgaactggcccgcgccaagaaggcgaaggtcgtcctggcc
gcccccaccggccgggccgccaagcgcctcgccgagctgaccggcgccgaggcctccacc
gtccaccgcctgctggagctgaagcccggcggcgacgcggcgtacgacaaggaccgcccg
ctggacgccgatctggtggtcgtcgacgaggcctccatgctggacctcctcctcgccaac
aagctggtgaaggcggtgcctcccggcgcccacctcctcttcgtcggcgacgtggaccag
ttgcccagcgtcggcgccggcgaggtcctccgtgacctgttggccgacggcagccccgtc
cccgccgtccgcctcaccaaggtcttccgccaggcccagcagtcgggcgtggtgaccaac
gcgcaccggatcaactccgggcagcacccggtcaccgacggcatgaaggacttcttcctc
ttcgtcgaggacgacacggaggaggccgggcgcctcacggtcgacgtggcggcccgtcgc
attccggccaggttcgggctcgacccgcgccgggacgtccaggtgctggcgcccatgcac
cgcggcccggccggcgcaggcaacctcaacgggctgctccagcaggccatcacccccgcc
cgtcccgacctggccgagaagcggttcggcggacgggtcttccgcgtcggcgacaaggtc
acccagattcgcaacaattacgagaagggcgagaacggcgtcttcaacggcaccgtcggc
gtggtcaccgcgctcgacccggtcgaccagcggctgacggtcctcaccgacgaggacgag
gaggtggcgtacgagttcgacgaactggacgagctggcgcacgcctacgcggtgaccatc
caccggtcccagggcagcgagtacccggccgtggtgatcccggtcaccaccggcgcctgg
atgatgctccagcgcaaccttctgtatacggcggtgaccagggcgaagaagctcgtcgtc
ctcgtcggctcccgcaaggcgatcggccaggcggtccgcacggtgtcggcgggccgcagg
tgcacggctctcgacttccggctcgcgccacggtcactgtga
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