Streptomyces akebiae: K1J60_29405
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Entry
K1J60_29405 CDS
T08702
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sakb
Streptomyces akebiae
Pathway
sakb03030
DNA replication
sakb03430
Mismatch repair
sakb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K1J60_29405 (holA)
03430 Mismatch repair
K1J60_29405 (holA)
03440 Homologous recombination
K1J60_29405 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sakb03032
]
K1J60_29405 (holA)
03400 DNA repair and recombination proteins [BR:
sakb03400
]
K1J60_29405 (holA)
Enzymes [BR:
sakb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K1J60_29405 (holA)
DNA replication proteins [BR:
sakb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K1J60_29405 (holA)
DNA repair and recombination proteins [BR:
sakb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K1J60_29405 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QYX80091
UniProt:
A0ABX8XY54
LinkDB
All DBs
Position
6818569..6819555
Genome browser
AA seq
328 aa
AA seq
DB search
MAKKTVNDDPLAPVTLAVGQEELLLDRAVQVVVAAAKAADADTDVRDLASDQLQPGTLAE
LTSPSLFAERKVVVVRNAQDLSADTVKDVKAYLGAPAEEITLVLLHAGGAKGKGLLDAAR
KAGAREVACPKMTKPGDRLAFVRGEFRTLGRSATPEACQALVDAIGSDLRELASAASQLV
ADVEGTIDEAVVGRYYTGRAEASSFEVADRAVEGRAAEALEALRWSLATGVAPVLITSAL
AQGVRAIGKLSSARGGRPGDLARELGMPPWKIDRVRQQMRGWTPDGVAVALRAVAEADAG
VKGGGDDPEYALEKAVVVIARAARSRRG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagactgtgaacgatgatcccctcgcccccgtgacgttggccgtggggcag
gaggagttgctgctcgatcgggctgtgcaggtggtggtggccgcggcgaaggccgcggac
gccgacacggatgtgcgggatctggcatcggaccagctgcagcccggcacgctcgccgag
ctgacgagtccctcgctcttcgcggagcgcaaggtcgtggtcgtacgcaacgcgcaggat
ctgtcggccgacacggtcaaggacgtgaaggcgtatctgggggctcccgccgaggagatc
accctggtgctgctgcacgcgggcggtgccaagggcaaggggctgctggacgcggcgcgc
aaggcgggggcgcgggaggtggcgtgccccaagatgacgaagccgggggatcggctggcg
ttcgtgcggggtgagttccggacgctcgggcggtcggcgacgccggaggcgtgccaggcg
ctcgtcgatgcgatcgggagtgatctgcgggagttggcgtccgcggcgtcgcagttggtg
gcggacgtcgagggaacgatcgacgaggcggtggtcgggcggtactacaccgggcgggcc
gaggcgtcgagcttcgaggtggccgatcgggccgtcgaggggcgggcggcggaggcgttg
gaggcgctgcggtggtcgctggccacgggggtggcgccggtgttgatcaccagtgcgctg
gcccagggggtgcgggcgatcgggaagttgtcgtcggcgcggggcgggcggccgggggat
ctcgcgcgggagttggggatgccgccgtggaagatcgatcgggtgcggcagcagatgcgg
gggtggacgccggacggggtggccgtggcgttgcgggcggtcgccgaggccgatgccggg
gtcaagggcggaggggacgatcctgagtacgcgctggagaaggcggttgtggtgatcgcg
cgggctgctcggtcgcgtcggggttga
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