Streptomyces akebiae: K1J60_33375
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Entry
K1J60_33375 CDS
T08702
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sakb
Streptomyces akebiae
Pathway
sakb03030
DNA replication
sakb03430
Mismatch repair
sakb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K1J60_33375 (dnaE)
03430 Mismatch repair
K1J60_33375 (dnaE)
03440 Homologous recombination
K1J60_33375 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sakb03032
]
K1J60_33375 (dnaE)
03400 DNA repair and recombination proteins [BR:
sakb03400
]
K1J60_33375 (dnaE)
Enzymes [BR:
sakb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K1J60_33375 (dnaE)
DNA replication proteins [BR:
sakb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K1J60_33375 (dnaE)
DNA repair and recombination proteins [BR:
sakb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K1J60_33375 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Tsr1_G-like
Motif
Other DBs
NCBI-ProteinID:
QYX80772
UniProt:
A0ABX8XYW3
LinkDB
All DBs
Position
7716526..7720065
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHTAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANKTGLHNLFKL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGELQTRLRLGQFDEALKSAAEYQD
IFGKDRYFLELMDHGIEIEHRVRDGLLEIGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTDEMYAIDSSDAWQEGCANTLLVAEQIDTSGMFEAKN
LMPKFDIPEGYTEVSWFREETMRGMHRRFPDGIPDDRMKQVEYEMDTIISMGFPGYFLVV
ADFIMWAKKQGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERISMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPSHPRYSEAGEIRSMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAIKMVKA
NKGVDLEMLALPLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHINYAERKNGRQEITPIHKELEEPLEEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFTIFQAGAKKNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMRIKVLPPNVNES
EQNFAAQGDDVILFGLSAVRNVGTNVVESIIRSRKAKGKYASFPDYLDKVEAVACNKRTT
ESLIKAGAFDSMGHTRKGLTAHFDPMIDNVVAVKRKEAEGQFDLFGGMGEDDSSEPGFGL
DVEFTTEEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMEMQVPDLSNAGTNAPVILTIPATRVTPPMVSRLGEILTHHKGDSEVRI
RLQGPTKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgttggacggt
gccgcgcggctcaaggacatgttcaacgcgtgcaacgagatgggcatgacccatatcgcc
atgtccgaccacggcaacctccacggggcctacgacttcttccacaccgcgaagaaggcc
ggcgtcaccccgatcatcggcatcgaggcgtacgtcgcgcccgagtcccgccgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgggacgacgtgtccggttcgggtggt
tacacgcacaagacgatctgggcggcgaacaagacgggcctgcacaacctcttcaagctc
tcctcggacgcgtacgccgagggctggctccagaagtggccccggatggacaaggagacc
atctcccagtggtccgaggggctcatcgcctccaccggctgcccctccggcgagctgcag
acccggttgcgcctcggccagttcgacgaggccctgaagtccgccgccgagtaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgagatcgagcac
cgggtccgcgacggcctcctggagatcggcaagaagctcggcatcccgcccctggtcacc
aacgactcgcactacacgtacgcgcacgaggcgaccgcgcacgacgcgctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttcaagttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggacgcctggcaggaaggctgc
gccaacaccctgctggtggccgagcagatcgacaccagcggcatgttcgaggcgaagaac
ctgatgccgaagttcgacatccccgaggggtacacggaggtcagctggttccgcgaggag
accatgcgcggcatgcaccgccgcttcccggacggcatcccggacgaccgcatgaagcag
gtcgagtacgagatggacaccatcatctcgatgggtttcccgggctacttcctcgtggtc
gccgacttcatcatgtgggccaagaagcagggcatcgcggtcggccccggacggggttcc
gcggccggctcgatcgtcgcgtacgccatgggcatcaccgacctggacccgatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcatctccatgcccgatgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatccggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggtgaccggctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcaccgacccctcccacccgcgc
tacagcgaggcgggcgagatccggtcgatgtacgagaacgaaccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggtgtgcacgcggccggc
gtgatcatgtccagcgagcccatcgtcgaccacgccccgatctgggtgcggcacaccgac
ggcgtgaccatcacccagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctcacgatcatggacgacgccatcaagatggtgaaggcc
aacaagggcgtcgacctggagatgctcgccctcccgctggacgaccccaagaccttcgaa
ctgctctgccgcggcgacacgctcggcgtcttccagttcgacggcggcccgatgcgctcc
ctgctccgccagatgcagcccgacaacttcgaggacatctccgccgtctcggccctgtac
cggccgggcccgatgggcatgaactcgcacatcaactacgccgagcgcaagaacggccgc
caggagatcacgccgatccacaaggagctggaggagccgctcgaagaggtcctcgcggtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggcggcgcagatcatcgccggt
tactcgctcggcgaggccgacatcctccgccgcgtgatgggcaagaagaagcccgaggaa
ctggcgaagaacttcaccatcttccaggccggcgccaagaagaacggctacagcgacgag
gccatccaggccctgtgggacgtgctggtcccgttcgccggctacgccttcaacaaggcc
cactccgccgcgtacggcctggtctcctactggacggcgtacctcaaggccaactacccg
gccgagtacatggccgcgctgctcacctcggtcaaggacgacaaggacaagtcggcggtc
tacctcaacgagtgccgccgcatgcgcatcaaggtgctcccgccgaacgtcaacgagtcc
gagcagaacttcgccgcccagggcgacgacgtgatcctcttcggcctctccgccgtccgt
aacgtcggtacgaacgtggtggagtcgatcatccgcagccgcaaggccaaggggaagtac
gcctccttcccggactacctcgacaaggtcgaggcggtcgcctgcaacaagcggaccacg
gagtcgctgatcaaggcgggcgccttcgactccatggggcacacccgcaagggcctcacc
gcgcacttcgacccgatgatcgacaacgtggtcgccgtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcggcatgggcgaggacgacagcagcgagccgggcttcgggctc
gacgtggagttcaccacggaggagtgggacaagacctatctgctcgcccaggagcgggag
atgctcggtctctacgtctccgaccaccccctcttcggcctggagcacgtgctctcggac
aaggccgacgcgggcatcgcccagctcaccggcggcgagcacgcggacggcgcggtcgtc
accatcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaacgcctgg
gccatcgccaccgtcgaggacctcgccggctccatcgagtgcatgttcttcccggcgacc
taccagctcgtctcgacccaactcgtcgaggacgcggtcgtgttcgtcaagggacgcctg
gacaagcgcgaggacgtgccgaggctcgtcgcgatggagatgcaggtccccgacctgtcg
aacgcgggcaccaacgcgccggtgatcctcaccatccccgccactcgggtcaccccgccc
atggtcagccggctcggcgagatcctcacccaccacaagggcgacagcgaggtccggatc
aggctccaggggccgaccaagacgaccgtgctccgcctcgaccggcaccgcgtcaagccc
gacccggccctgttcggcgacctgaaggtactgctcggaccgtcctgcctggccggctga
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