Streptomyces akebiae: K1J60_38000
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Entry
K1J60_38000 CDS
T08702
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sakb
Streptomyces akebiae
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sakb03400
]
K1J60_38000
DNA repair and recombination proteins [BR:
sakb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K1J60_38000
Archaeal homologous recombinant proteins
K1J60_38000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Metallophos_3
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
QYX81588
LinkDB
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Position
8740855..8742018
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AA seq
387 aa
AA seq
DB search
MRILHTSDWHLGRTFHRVNMLGAQAEFIGRLVATVRERDVDAVVVAGDVYDRAVPPLAAV
ELFDDALHRLAELDVPTVMISGNHDSARRLGVAAGLIDRAGIHLRTSASAAGTPVLLSDA
HGDVAFYGLPYLEPALVKDEFGVEKAGHETVLAAAMDRVRADLATRPTGTRSVVLAHAFV
TGGEPSDSERDISVGGVSSVPAGVFDGVDYVALGHLHGSQTLTDRVRYSGSPLPYSFSEA
EHRKSMWLVDLGADGSVDAERIDCPVPRPLARIRGRLDDLLADPDLARHEEAWVEATLTD
PVRPAEPMARLCERFPHTLSLVFDPERAPGDPDVSYARRLAGRDDQQIAEDFVAHVRGTG
PDEHERTVLRDAFDAVRADETVREVAR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
ttgagaattctgcacacctccgactggcatctgggtcggacgttccaccgggtgaacatg
ctcggcgcgcaggccgagttcatcggtcgtctggtcgcgacggtgcgagagcgcgacgtc
gacgcggtggtcgtggccggggacgtgtacgaccgggcggtgccgccgctggccgcggtc
gagctcttcgacgacgccctgcaccgcctggccgagctggacgtgcccacggtgatgatc
tccgggaaccacgactcggcgcgacggctcggtgtcgcggcgggcctcatcgaccgggcc
ggcatccatctgcggacgtcggcctcggccgccgggacgcccgtgctgctgtcggacgcc
cacggcgacgtcgccttctacgggctgccgtacctcgaacccgcccttgtgaaggacgag
ttcggggtcgagaaggcgggccacgaaacggtgctcgccgccgccatggaccgcgtccgg
gccgacctcgccacccggccgacgggcacccgttccgtcgtcctcgcccatgccttcgtc
accggcggcgaacccagcgacagcgagcgggacatctccgtcggcggcgtctcctccgtg
cccgccggtgtcttcgacggtgtcgactacgtcgcgctgggtcatctgcacggcagccag
accctcaccgaccgcgtgcgctactcgggttccccgctgccctactccttctccgaggcc
gagcaccgcaagagcatgtggctggtggacctcggagccgacggttcggtcgacgccgag
cggatcgactgccccgtgccacggcccctcgcccggatccgagggcggttggacgacctg
ctcgccgatccggacctggcccggcacgaggaggcatgggtcgaggccaccctgaccgac
cccgtccggccggccgagcccatggcccggctgtgcgaacgcttcccgcacacgctcagt
ctcgtcttcgaccccgaacgagcccccggcgacccggacgtctcctacgcccggcgcctc
gccggccgggacgaccagcagatcgccgaggacttcgtggcccacgtccgcggtaccggc
cccgacgaacacgaacggaccgtgctcagggacgcgttcgacgccgtacgggccgacgag
acggtccgggaggtcgcccgatga
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