Streptomyces akebiae: K1J60_43295
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Entry
K1J60_43295 CDS
T08702
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sakb
Streptomyces akebiae
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sakb03021
]
K1J60_43295
Transcription machinery [BR:
sakb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K1J60_43295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
GerE
DUF7343
MarR
HTH_Crp_2
MarR_2
HTH_3
HTH_1
HTH_10
Trp_repressor
YdaS_toxin
OrfB_IS605
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QYX83497
LinkDB
All DBs
Position
complement(9991781..9992608)
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AA seq
275 aa
AA seq
DB search
MAEGVDLPLIEDPSQVRPKDAREMSRQFFDRLAMLEEGTHTYQYVRNTLIEMNLSLVRYA
ASRFRGREDSLEDIVQVGTIGLIKAIDRFELSREVEFTTFAVPYIVGEIKRFFRDTSWAV
HVPRRLQEARVELARATDELQSRLGRMPTTRELSELMSLSEEEVIEARKASNGYNTSSLD
AALTSDGGEDGDTVLGDLIGEEDPSLRLVEDFHSLAPLIAELDDRERRILHLRFVEEQTQ
SQIAEELGVSQMHVSRLISRIIKRLRAGMLEPGVA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggggtggacctgcccctcatcgaggacccgtcgcaggtgaggcccaaggac
gcgcgggagatgtcccgccagttcttcgaccggctggccatgctggaagaaggcacccat
acctatcaatacgtacgcaacacgctcatcgagatgaacctctcactggtgcggtacgcg
gcctcgcgcttccgcggtcgtgaggactccctcgaggacatcgtccaggtcgggaccatc
gggctcatcaaggccatcgaccggttcgagctgtcccgggaggtggagttcaccacgttc
gccgtgccgtacatcgtcggcgagatcaagcggttcttccgggacaccagctgggcggtg
catgtccctcggcggttgcaggaggcgcgggtggagctggcccgcgcgacggacgagttg
cagtcccggctgggccggatgccgacgacgcgcgagctgtcggagctgatgtcgctgtcc
gaggaggaggtcatcgaggcgcgcaaggcgtccaacggctacaacacctcctcgctcgac
gcggcgctcacctccgacggcggcgaggacggcgacacggtgctgggagacctcatcggc
gaggaggacccgtcgctgcgactcgtggaggacttccactcgctcgcgccgctgatcgcc
gaactcgacgaccgtgagcggcggatcctgcatctgcggttcgtggaggaacagacccag
tcgcagatcgccgaggaactgggggtgtcccagatgcatgtgtcccggctgatcagccgc
atcatcaagcggctgcgcgcgggcatgctggaacccggagtcgcctga
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