Sphingopyxis alaskensis: Sala_0203
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Entry
Sala_0203 CDS
T00361
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sal
Sphingopyxis alaskensis
Pathway
sal00300
Lysine biosynthesis
sal00470
D-Amino acid metabolism
sal01100
Metabolic pathways
sal01110
Biosynthesis of secondary metabolites
sal01120
Microbial metabolism in diverse environments
sal01230
Biosynthesis of amino acids
Module
sal_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sala_0203
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sala_0203
Enzymes [BR:
sal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Sala_0203
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Herpes_HEPA
Motif
Other DBs
NCBI-ProteinID:
ABF51927
UniProt:
Q1GWP5
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All DBs
Position
217574..218833
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AA seq
419 aa
AA seq
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MDHFEYRDGVLHAEDIPLPRIAKEIGTPVYVYSRATLERHAQVFADALRDIPRKHIAFAI
KCNPNLGVLRVLARQGYGADVVSGGELERALAAGMAAEDIVFSGVGKTRAELAQGLDRGI
GQFNIEHEPEGVALSEIAVAKEMTARAVLRVNPDVDAGTHAKISTGKAENKFGVGIDSAP
AIFDRLSALPGLKMRGVALHIGSQLTSLDPLEAAFERVGRLVADLRAAGHSITHVDLGGG
LGVPYRPEDNPPTPAEYGAMVARVTKDWDVTLMFEPGRVIAGNTGVLLTEVLWVKPGATH
PFVIVDAAMNDLARPALYDAWHDFVAVKPTGEKMIASIVGPVCETGDTFARDREIDAVQP
GALAVFRTAGAYGATMASTYNSRSLVPEVLVDGDRYITVADRIAAGTIMAAERVPDWID
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttgaatatcgtgacggcgtcctccacgccgaagacatcccgctgccgcgt
attgccaaggaaatcggcacccccgtctatgtctattcgcgcgcgacgctcgaacgccac
gcgcaggtgttcgccgacgcgctcagggatattcccaggaagcacatcgcctttgcgatc
aagtgcaaccccaaccttggcgtgctgcgcgtcctcgcgcggcagggctatggcgccgac
gtcgtgtcgggcggcgaactcgaacgcgcgctcgccgcgggcatggcggcggaggacatc
gttttttctggggtcggcaagacgcgcgccgagctggcgcaggggctcgaccgcggcatc
ggccagttcaacatcgagcatgaacccgagggcgtcgcgctgtccgaaatcgcggtggcg
aaggaaatgaccgcgcgcgcggtgctgcgcgtcaatcccgacgtcgatgccggcacccac
gccaagatttcgaccggcaaggccgaaaacaagttcggcgtcggcatcgattcggcgccc
gcgatcttcgaccggctctcggcgttgccggggctcaagatgcgcggcgtcgcgctccat
atcggcagccagctcaccagcctcgatccgttggaggccgcgttcgagcgcgtcggccgc
ctcgtcgccgacctgcgcgctgcggggcacagcatcacccacgtcgacctcggcggcggc
cttggtgtcccctatcggccggaggacaatcccccgactccggccgaatatggcgcgatg
gtcgcacgcgtgacaaaggattgggacgtcaccctgatgttcgagcccggccgcgtcatt
gcgggcaacaccggcgtgctcctgaccgaagtgctgtgggtcaagcccggcgcgacccac
cccttcgtcatcgtcgacgccgcgatgaacgaccttgcgcgccccgcgctctacgatgcc
tggcatgattttgtcgcggtgaagccgacgggtgaaaaaatgatcgcgtcgatcgtcggc
ccggtgtgcgaaacgggcgacaccttcgcgcgcgaccgcgaaatcgacgcggttcagccg
ggcgccctcgcggtgttccgtaccgcgggcgcttatggtgcgaccatggcctcgacctac
aacagccgcagcctcgtgcccgaggtgctcgtcgatggtgatcgctacatcaccgtcgcc
gaccgcatcgccgcgggcacgatcatggcggcggagcgcgtccccgactggatcgattga
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