Sphingopyxis alaskensis: Sala_0205
Help
Entry
Sala_0205 CDS
T00361
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K03974
psp operon transcriptional activator
Organism
sal
Sphingopyxis alaskensis
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sal03000
]
Sala_0205
Transcription factors [BR:
sal03000
]
Prokaryotic type
Other transcription factors
Others
Sala_0205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
Mg_chelatase
AAA_16
AAA
HTH_28
MCM
AAA_2
AAA_22
AAA_19
HTH_23
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ABF51929
UniProt:
Q1GWP3
LinkDB
All DBs
Position
complement(219907..220932)
Genome browser
AA seq
341 aa
AA seq
DB search
MERETQFIGQSAAFQDAVDRASQAALLDRPVLVIGERGTGKELIAERLHRLSTRWDRPYV
IMNCAAMPETLIESELFGHEAGAFTGATRSRAGRFEEADGGTLFLDELATMSMGAQERLL
RAVEYGEITRVGASRPIRVDVRIVAATNEHLPALVEENRFRADLLDRLSFEVITLPPLRA
REGDIEVLATYFGQRMAAVVGWDEWPGFGPRALAAMEGHDWPGNVRELRNVIERAVYRWG
DPTKPIDALSFDPFASPWQPTVRAAKAERANAAASVAAPPAAPSPSPGPVSDLRAAVDSY
EKAILADTMARCRYNQKVAAEALGLSYDQIRHALKKHGLNQ
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgaaacgcaattcatcggccagtcggcggcctttcaggacgcggtcgatcgc
gcgagccaggcggcgctgctcgaccgcccggtgctggtgatcggcgagcgcgggacgggc
aaggaactgatcgccgagcgcctgcaccgtctgtcgacgcgctgggatcggccttatgtg
atcatgaactgcgccgcgatgcccgagacgctgatcgaaagcgaactgttcggacacgaa
gcgggcgccttcaccggcgcgacgcgcagccgcgcgggacgcttcgaggaggccgacggc
ggcacgctctttctcgacgaactggcgaccatgtcgatgggcgcgcaggaacggctgctc
cgcgcggtcgaatatggcgagatcacgcgcgtcggcgcgtcgcgcccgatccgcgtcgat
gtgcgcatcgtcgcggcgaccaacgagcatctccccgcgctggtcgaagaaaaccggttc
agggccgacctgctcgaccggctgtcgttcgaggtcatcaccctgccccccttgcgcgca
cgcgaaggcgatatcgaggtgcttgccacttacttcgggcagcgcatggcggcggtcgtc
ggctgggacgaatggcccggattcggcccgcgcgcgctggcggcgatggaagggcacgac
tggccgggcaacgtccgcgaactcaggaacgtcatcgagcgcgccgtctatcgctggggc
gatccgacgaagccgatcgacgcattgagcttcgacccctttgccagcccgtggcaaccc
acggtgcgcgcggcgaaggccgaacgtgcgaacgccgcggcgtccgtcgccgcccctccc
gccgcgccgtcaccctcgccgggcccggtgagcgacctgcgcgctgcggtcgacagctat
gaaaaggcgatcctcgccgacacgatggcgcgatgccgctataaccagaaagtcgccgcc
gaggcgcttggcctgagttacgaccagattcgccacgcgctgaaaaaacatggactgaat
caatga
DBGET
integrated database retrieval system
