Sphingopyxis alaskensis: Sala_0417
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Entry
Sala_0417 CDS
T00361
Name
(GenBank) Integrase, catalytic region
Organism
sal
Sphingopyxis alaskensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
HTH_7
Linker_histone
HTH_IclR
HTH_23
HTH_3
HTH_40
RPA_C
Motif
Other DBs
NCBI-ProteinID:
ABF52138
UniProt:
Q1GTQ6
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Position
424434..425963
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AA seq
509 aa
AA seq
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MIDMDLLSVIRRWHFRQGMAIREIKRRTGLSRNTIRKYLRADAVEPVFKVPDRPSKLDPF
SEKLTGWLRVESGKSRKQKRTAKQLYADLVTLGYDGSYARVAAFARDWKRDRQYEQQTSG
RGTFVPLVFQPGEAFQFDWSEDYAVLGGKQVKLQVAHTKLSHSRAYIVRAYLLQTHEMLF
DALTQAFRVLGGIPQRGIFDNMKTAVDKIGRGKARQVNARFAALASHYLFETDFCNPASG
WEKGQVEKNVQDARHRLWQPMPSFPDLAALNAWLEEQCVAQWAEIQHGTLPGTIADVHAE
EVISLMPMGRPFDGFVEQTKRVSPTCLIAFERNRYSVPASFANRPVSLRVYPERLVIVAE
GQVLCEHERIIDRSHQKPGRTIYDWRHYLAVVQRKPGALRNGAPFLEMPEAFRQLQTQLL
KRLGGDKEMVEILSLVLHHDEQSVLCAVELALEDGVPTKTHVLNVLHRLIDGKAPPAPTI
DAPQALRLSTEPKADVGRYDTLRELRHAS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacatggacctactcagtgtgatccgccggtggcatttccgccaaggcatggcc
attcgtgagatcaagcggcggaccggcttatcacgcaacacgatccgcaaatatctgcga
gcagacgcggtagagccggtgtttaaggttcccgaccggccgagcaagctggacccgttt
tccgagaagctgacaggttggctgcgcgtggagtcgggcaaatcgcgcaaacagaaacgt
acggccaagcagctttacgctgatctcgtcactttgggctatgacggctcgtatgctcgc
gtggcggcctttgcccgcgattggaagcgcgaccgccagtatgagcagcaaaccagcgga
cgcgggaccttcgtgccgctggttttccagcctggcgaagccttccagttcgattggagc
gaggattacgccgtgctgggtggcaagcaggtcaagctgcaggtggcccataccaagcta
tcacacagccgggcctacatcgttcgggcctatctgttgcagacgcatgagatgctgttc
gacgccctgacgcaggcattccgagtgctgggcggcattccccaacgcgggatctttgat
aatatgaagacggcggtcgacaagatcggccgtggtaaggcgcgccaagtcaacgcccgg
ttcgccgccctggccagccattatctattcgaaacagacttctgcaatccagcatcgggc
tgggaaaagggacaggtcgagaagaacgttcaggatgcccgtcaccgtctgtggcagccc
atgcccagcttcccagatcttgcagctctcaatgcctggcttgaggaacaatgtgtcgcg
cagtgggcagaaatccagcacggcacattacctggcaccatcgccgatgtgcacgccgaa
gaggtaatcagcttgatgcccatggggaggcccttcgatggcttcgtcgagcagaccaag
cgcgtgtcgcccacctgcctaatcgccttcgagcgcaaccgttacagtgtgccagcctcc
tttgccaatcggcccgtcagcctgagagtttaccccgagcggcttgtcatcgtcgcggaa
ggacaagtcttgtgcgaacacgagcggatcattgaccggtcccatcagaagccgggacgc
acgatctatgactggcgccactatctggctgtcgttcagcgcaagcccggcgccctgcgc
aatggtgcgccattccttgagatgcccgaggcattccgccagttgcagacccaactgctc
aagcggctcggcggtgacaaggagatggttgagatcctatctcttgttttgcaccatgat
gagcagtccgttttatgcgcagtcgagttggctcttgaggacggtgtgccaactaaaact
catgtgctcaacgtgctgcaccgcctgattgacggcaaggcgccaccggcaccaacgatc
gatgccccgcaggccctgcgccttagcacggagcccaaagccgatgtaggccgctacgac
acgctgagggagctgcgtcatgcgtcatga
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