Sphingopyxis alaskensis: Sala_0422
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Entry
Sala_0422 CDS
T00361
Name
(GenBank) single-strand binding protein
KO
K03111
single-strand DNA-binding protein
Organism
sal
Sphingopyxis alaskensis
Pathway
sal03030
DNA replication
sal03430
Mismatch repair
sal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sala_0422
03430 Mismatch repair
Sala_0422
03440 Homologous recombination
Sala_0422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sal03032
]
Sala_0422
03400 DNA repair and recombination proteins [BR:
sal03400
]
Sala_0422
03029 Mitochondrial biogenesis [BR:
sal03029
]
Sala_0422
DNA replication proteins [BR:
sal03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sala_0422
DNA repair and recombination proteins [BR:
sal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Sala_0422
TLS (translesion DNA synthesis) factors
Other SOS response factors
Sala_0422
Mitochondrial biogenesis [BR:
sal03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
Sala_0422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
Motif
Other DBs
NCBI-ProteinID:
ABF52143
UniProt:
Q1GW29
LinkDB
All DBs
Position
complement(428957..429379)
Genome browser
AA seq
140 aa
AA seq
DB search
MDPECSIRRKPMTNLVILVGRIARDPETRTTQGGTSITSISVVTDRPARKDGKTYKDKNG
YTAKDSEFHRITCFNGLSQNVAKYCTKGQLVTVEGRIHYTQWEDQSGAKRYGCEIIADKV
DFLTKGRSGGNEGAPDIDED
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atggacccggaatgctcgatcaggagaaagcccatgaccaatctcgttatcctcgttggc
cgtatcgctcgcgaccccgaaacccgcaccacccagggtggaaccagcatcacctcgatc
tcggtcgtgaccgatcggcccgcccgcaaggatggcaagacctacaaggacaaaaacggc
tacaccgccaaggacagcgaattccaccggatcacctgcttcaacggcctgagccagaac
gtcgccaagtattgcaccaagggccagctcgtgacggtcgaaggccgcatccactacacg
cagtgggaggatcagagcggcgccaagcgctacggctgcgagatcatcgccgacaaggtc
gacttcctcaccaagggccgttcgggcggcaacgagggagcacccgatatcgacgaggac
tga
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