Sphingopyxis alaskensis: Sala_0610
Help
Entry
Sala_0610 CDS
T00361
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
sal
Sphingopyxis alaskensis
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sal03021
]
Sala_0610
03009 Ribosome biogenesis [BR:
sal03009
]
Sala_0610
Transcription machinery [BR:
sal03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Sala_0610
Ribosome biogenesis [BR:
sal03009
]
Prokaryotic type
rRNA transcription factors
Sala_0610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_1
KH_NusA_C
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ABF52331
UniProt:
Q1GVJ1
LinkDB
All DBs
Position
619846..621492
Genome browser
AA seq
548 aa
AA seq
DB search
MATAISANKAELLAIANSVASEKMIDKAIVIEAIEEAIQRAARARYGAENDIRAKLDPQT
GDLRLWRVVEVVETVEDYFKQVDLAAGQKLQKDARIGDFIVDPLPAVDLGRIDAQSAKQV
IFQKVREADRERQYQEFKDRAGEIITGVVKSVEFGHIVVNLGRAEGVIRRDQQIPRELMR
VGDRVRALILSVRSETRGPQIFLSRAHPDFMKKLFAQEVPEIYDGIIEIKAAARDPGSRA
KIGVISYDSSIDPVGACVGMKGSRVQAVVQELQGEKIDIIPWSEDTATFVVNALQPATVQ
RVVIDEDDGRIEVVVPDDQLSLAIGRRGQNVRLASQLTGKQIDIMTEADASEKRQREFVE
RSTMFQEELDVDETLAQLLVAEGFSELEEVAYVPLDELASIEGFDEELAQELQSRAAEGL
ERREEAARAERRELGVEDALADIPHLTEAMLVTLGKAGIRTLDDLADLATDELIAKKRTD
NRRGPARSERAEDKGGVLGEYGLSEEQGNEIIMAARAHWFDDEESSEPATAPAAEPQNGE
AADADPAQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggccactgccatttccgccaacaaggccgaactgctcgcgatcgccaacagcgtcgcc
agcgagaagatgatcgacaaggctatcgtcatcgaggcgatcgaggaagcgatccagcgt
gccgcgcgcgcccgctatggcgccgagaacgacattcgcgccaagctcgacccgcagacc
ggcgacctgcgcctgtggcgcgtcgtcgaagtggtcgagacggtcgaggattatttcaag
caggtcgacctcgccgccgggcaaaagttgcagaaggacgccaggatcggcgacttcatc
gtcgatccgctgcccgccgtcgaccttggccgcatcgacgcgcagtcggcgaagcaggtg
atcttccagaaggttcgcgaagccgaccgggaacgccagtatcaggagttcaaggatcgc
gccggagagattatcaccggcgtcgtgaaatcggtcgagttcggccatatcgtcgtcaat
ctgggccgcgccgagggcgtgatccgccgcgaccagcaaatcccgcgcgaattgatgcgc
gtcggcgaccgcgtccgcgcgctgatcctgtcggtgcgcagcgaaacgcgcgggccgcag
attttcctctcgcgcgcgcatcccgacttcatgaaaaagctgttcgcgcaggaggtgccc
gaaatctatgatggcatcatcgagatcaaggctgccgcgcgcgatccgggcagccgggcg
aagatcggcgtgatcagctatgacagcagcatcgaccccgtcggcgcctgtgtgggcatg
aagggcagccgcgttcaggcggtcgttcaggaattgcagggcgaaaagatcgacatcatt
ccctggtcggaggacacggcgaccttcgtggtcaatgcgcttcagccggccacggtgcag
cgcgtcgtcatcgacgaggatgatggtcgcatcgaggtcgtcgtccccgacgatcagctc
agcctcgccatcggtcgccgcggccagaacgtccgtcttgccagccagctgaccggcaag
cagatcgatatcatgaccgaggcggatgcgagcgagaagcggcagcgcgaattcgtcgaa
cgctcgacgatgttccaggaggaactcgacgtcgacgaaacactggcacagctcctcgtc
gccgaaggcttcagcgagctcgaggaagtcgcctatgtgccgctcgacgaactggcaagc
atcgagggtttcgacgaggaactggcgcaggaactgcagagtcgcgctgccgaggggctg
gagcgtcgcgaggaggcggcgcgcgccgagcgtcgcgaactgggcgtcgaggatgcactc
gccgacatcccgcacctgaccgaagcgatgcttgtcacgctcggcaaggccggaatcagg
acgctcgacgatcttgcagaccttgcgaccgacgaactgatcgccaagaaacgaaccgac
aaccgccgcggcccggcgcgcagcgagcgcgccgaggacaagggcggcgtgctcggcgaa
tatggcctgagcgaagagcagggcaacgagatcatcatggcggcgcgtgcgcactggttc
gacgatgaggagtcgagcgagccggcaaccgcgcccgcggcggagccgcaaaacggggag
gccgccgatgcggaccccgcgcaatga
DBGET
integrated database retrieval system
