Sphingopyxis alaskensis: Sala_0682
Help
Entry
Sala_0682 CDS
T00361
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sal
Sphingopyxis alaskensis
Pathway
sal00061
Fatty acid biosynthesis
sal00071
Fatty acid degradation
sal01100
Metabolic pathways
sal01212
Fatty acid metabolism
sal02024
Quorum sensing
sal04146
Peroxisome
Module
sal_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sala_0682
00071 Fatty acid degradation
Sala_0682
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sala_0682
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sala_0682
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sal01004
]
Sala_0682
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sal04147
]
Sala_0682
Enzymes [BR:
sal01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sala_0682
Lipid biosynthesis proteins [BR:
sal01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sala_0682
Exosome [BR:
sal04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sala_0682
Exosomal proteins of breast cancer cells
Sala_0682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Cap17-like_N
MazE_antitoxin
ABATE
Motif
Other DBs
NCBI-ProteinID:
ABF52403
UniProt:
Q1GVB9
LinkDB
All DBs
Position
691469..693274
Genome browser
AA seq
601 aa
AA seq
DB search
MKLENPHLDHFPSLVAMFFDRAARGGEDPFLWHKADRAWQALSWREVAEQVAALAHNLRK
LGLKEGDRVVLVSENRPEWCIADLGIMAAGCITVPTYTTNTERDHQHILDNSGARAVIVS
TAKLARVLMPAVMRSDAHIVISMESLRVGQQGDVSVHDWAPLVAGGAAWVEEAKARGLGV
KREDTACLIYTSGTGGAPRGVMQHHGAILHNAAGAAEILVNDFGIGDEEVFLSFLPLSHA
YEHSGGQFLPIMVGAQIYYSEGLEKLVSNIEETRPTIMVVVPRLFEVIRARMIKAVEKQG
KLANWMLAQALRVGEKDYARRMGVLDRPVDILLNRLFRPKIRKRFGGRMKALVSGGAPLN
PEIGVFFHSIGLTLLQGYGQTEAGPVISCNRPKTGLKMDTVGPPLMNTEVRIADDGEICV
RGELVMKGYWRNPAETERVLIDDWLHTGDIGHIDEAGRIVITDRKKDLIVNDKGDNVSPQ
RVEGMLTLQPEILQAMVYGDKRPHLVGILVPDPEWAAEWAEAEGLPKEMPLLREHEKFRA
AIRAAVDRVNGQLSVIEKVRKFDFADEAFTIENEQMTPSMKIRRHVLREIYADKIAALYK
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggaaaacccccatctcgaccatttccccagcctggtcgcgatgttcttcgac
cgcgcggcgcgcggcggcgaggatccctttctgtggcacaaggccgaccgcgcctggcag
gcgctgagctggcgcgaggtcgccgaacaggtcgcggcgctcgcgcacaatctgcgcaag
ctggggctgaaagagggcgaccgggtggtgctggtgagcgagaaccgtcccgaatggtgc
atcgccgaccttggcatcatggccgcggggtgcatcacagtcccgacctatacgaccaac
accgaacgcgatcatcagcatatcctcgacaacagcggcgcgcgcgcggtgatcgtgtcg
accgcaaagctcgcgcgcgtgctgatgcccgcggtgatgcgctccgacgcgcatattgtc
atttccatggaaagtctgcgcgtcgggcaacagggcgacgtgtcggtccacgactgggcg
ccgctggttgcaggcggcgccgcatgggtcgaggaggcaaaggcgcgcggcctcggcgtc
aagcgcgaggacaccgcctgcctcatctataccagcggcacgggcggggcgccgcgcggc
gtgatgcagcatcatggcgcgatcctgcacaacgccgcgggcgccgccgaaatcctggtc
aatgatttcgggatcggcgacgaggaagtgttcctctccttcctgccgctcagtcacgcc
tatgaacattcgggcgggcagttcctgccgatcatggtcggcgcgcaaatctattacagc
gaggggctcgaaaagctcgtctcgaacatcgaggagacgcgcccgacgatcatggtcgtc
gttccgcggctgttcgaggtgatccgcgcgcgaatgatcaaggcggttgaaaagcagggc
aagctcgcgaactggatgctggcccaggcgctgcgcgtcggcgaaaaggattatgcgcgg
cgcatgggcgtgctcgaccggccggtcgatatattgctcaaccggctgttccgtcccaag
atccggaaaaggttcggcggccggatgaaggccctggtatcgggcggcgcgccgctcaac
ccggagatcggcgtctttttccattcgatcgggctgacgctgctgcaaggctatggtcag
accgaggcgggaccggtcatcagttgcaaccggccgaaaacgggcctcaagatggatacc
gtcggtcccccgctgatgaacaccgaggtgcgcatcgccgacgacggcgaaatctgtgtg
cgcggcgaactggtgatgaagggttattggcgcaatcccgccgaaaccgagcgcgtgctg
atcgacgattggctccacaccggcgacatcggccatatcgacgaagcggggcgcatcgtc
atcaccgaccgcaagaaggacctgatcgtcaacgacaagggcgacaatgtctcgccgcag
cgcgtcgaggggatgctgacgctgcaacccgagatattgcaggcgatggtctatggcgac
aagcgcccgcacctcgtcggcatcctggtgcccgatcccgaatgggcggccgaatgggcg
gaggccgaagggctgccgaaagagatgccgctgctgcgcgaacatgaaaagttccgtgcg
gcgatccgcgccgcggtcgaccgcgtcaacgggcagctttcggtgatcgaaaaggtgcgc
aagttcgacttcgccgacgaagccttcaccatcgagaatgaacagatgacgccgtcgatg
aaaatccgccgccacgtgctgcgggagatttatgcggacaagattgcggccttgtacaag
gcataa
DBGET
integrated database retrieval system
