Sphingopyxis alaskensis: Sala_0796
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Entry
Sala_0796 CDS
T00361
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sal
Sphingopyxis alaskensis
Pathway
sal03030
DNA replication
sal03430
Mismatch repair
sal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sala_0796
03430 Mismatch repair
Sala_0796
03440 Homologous recombination
Sala_0796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sal03032
]
Sala_0796
03400 DNA repair and recombination proteins [BR:
sal03400
]
Sala_0796
Enzymes [BR:
sal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sala_0796
DNA replication proteins [BR:
sal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sala_0796
DNA repair and recombination proteins [BR:
sal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sala_0796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
RuvB_N
AAA_5
AAA_22
AAA_30
AAA_16
AAA_14
AAA_19
AAA_assoc_2
PIF1
EF-hand_1
AAA_2
AAA_24
AAA_18
Glyco_tranf_2_5
DUF815
Cys1
Motif
Other DBs
NCBI-ProteinID:
ABF52516
UniProt:
Q1GV06
LinkDB
All DBs
Position
801674..803371
Genome browser
AA seq
565 aa
AA seq
DB search
MSDSAHDETPMLGMDLPEAPAPAASSGPYRVLARKYRPQTFAELIGQDAMVKTLGNAIAR
DRLAHAFLMTGVRGVGKTSTARLIAKALNCIGPDGQGGPTIDPCGVCEPCRAITEGRHID
VIEMDAASNTGVDDVREIIEAVRYAAVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPPH
VKFLFATTEVNKVPVTVLSRCQRFDLRRITPDMLFAHFSAILQKEGVEAEAPAIWLIANA
AEGSVRDGLSILDQAIAHADLDGGGKVSAEQVRAMLGLSDRSSIAGLMAAILEGNSGGAI
DLARAQYALGIEPVAMVRGLMELTHAITLAKVSRHDDPALAVADRERITDWAQKLGFAPL
NRLWQLLLKGHDEVLRANNPLEHLEMLLLRVIYAASLPDPGELAKLLESGGIPAMPVAAA
AAATGSERAAADPAPAAGPTTGALTIAQIHRLLESTGHHQLARQVYDDLRILELEPGRLV
YAPVSALDGDFARRLGEALFGQTGSRWQVREGTGEGRPSLAQMKAAQRADNEARIRELPV
VKAALAAFPDARLVEGDNNQHRSNP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattccgcccacgacgaaaccccgatgctgggcatggacctgcccgaggcacct
gcgcccgcggcatcgtccggcccttaccgtgttctggcacgcaaatatcgcccgcaaacc
tttgcggagctgatcgggcaggatgcgatggtgaagacgctgggcaatgcgatcgcgcgc
gaccggctggcgcacgccttcctgatgaccggggtgcgcggggtcggcaagacatcgacc
gcgcggctgatcgccaaggctttgaactgcatcggccccgacgggcagggcgggccgacg
atcgacccctgcggcgtgtgcgaaccgtgccgcgcgatcaccgagggtcgccacatcgac
gtcatcgagatggacgccgcgtcgaacaccggcgtcgacgatgtgcgcgagattatcgag
gcggtgcgctatgctgcggtgtcggcgcgctacaagatctatatcatcgacgaagtgcat
atgttgtcgcgtaatgccttcaatgcgctcctgaaaacgctcgaagagccgccgccgcac
gtcaagttcctgttcgcgaccaccgaggtcaacaaggtgccggtgacggtgctgtcgcgc
tgccagcggttcgacctgcgccgcatcacccccgacatgctgttcgcgcatttcagcgcg
attttgcagaaagagggcgtcgaggccgaggcgcccgcgatctggctgatcgccaatgcc
gccgaaggatcggtgcgcgacggcctgtcgatcctcgaccaggcgatcgcccacgccgat
ctggacggcggtggcaaggtcagcgccgaacaggtgcgcgccatgctcggcctgtccgat
cgttcgtcgatcgccgggctgatggcggcgattctcgaggggaacagcggcggcgcgatc
gaccttgcgcgcgcgcaatatgcgctggggatcgaacccgtcgcgatggtgcgcggcctg
atggagctgacccatgcgatcacgctcgcgaaggtatcgcgccacgacgatcccgcgctc
gccgtggccgaccgcgaacgcatcaccgactgggcgcaaaagctgggctttgctccgttg
aaccggctgtggcaattgctgctcaagggccatgacgaggtgctgcgcgcgaacaatccg
ctcgaacatctcgaaatgctgctgctgcgcgtcatctatgccgcgtcgttgcccgatccg
ggtgagcttgcgaaattgctcgaatcgggcggcataccggcgatgcccgtcgcagccgcc
gcggcggcgacagggtcggaacgcgccgcggcggaccctgcgcccgcagccgggcccacc
acaggcgcgctcaccatcgcacagattcaccggctcctcgaaagcacgggacatcatcag
cttgcgcggcaggtttacgacgatctccggattctggagctggagccgggtcgccttgtc
tatgcacccgtctccgcgctcgacggcgattttgcgcgacggctcggcgaagcgctgttc
ggtcagacgggcagccgctggcaagtgcgcgaaggcacgggcgaggggcgccccagcctg
gcgcagatgaaggcggcgcagcgcgccgataatgaggcacgcattcgcgaactgcccgtc
gtgaaggccgcgctggcggcctttcccgacgcgcggcttgtcgaaggcgacaataatcag
cataggtcgaacccatga
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