Sphingopyxis alaskensis: Sala_1084
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Entry
Sala_1084 CDS
T00361
Name
(GenBank) Recombinational DNA repair protein (RecF pathway)-like protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sal
Sphingopyxis alaskensis
Pathway
sal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sala_1084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sal03400
]
Sala_1084
DNA repair and recombination proteins [BR:
sal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sala_1084
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Sala_1084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
ABF52801
UniProt:
Q1GU71
LinkDB
All DBs
Position
1113355..1113933
Genome browser
AA seq
192 aa
AA seq
DB search
MRAHGEHGAILRALTHEAGLVAGYVRGGRSRRLRPILMPGNRVALELRSRTEEQLGGATV
ELLESRAPLLGEPLAAAAIDWVTSLTVAVLPEGQPFPALYIALSAVLEAIGVAPSARQWA
LALGRYELLLLAELGFGLEDKPRAASSPSMAEMLDFLSVTGHFIDRDLLDGRNRALAGVR
QRLIDRLGRVVA
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgcgcatggcgagcatggcgcgatcctgcgtgcgctgacgcacgaggcggggctg
gtcgcgggctatgtccgcggcgggcgatcgcggcggctgcggcccatattgatgccgggc
aaccgcgttgcgctggagctgcggtcgcgcaccgaagagcagcttggcggcgcgacggtc
gagctgctggaaagccgcgcgcccttgctcggcgaaccgttggcggcggcggcgatcgac
tgggtgaccagcctgacggtggccgtcctgcccgaaggacagccctttccggccctttac
attgcgctgtcagcggtgctggaagcgatcggcgttgccccatcggcgcggcaatgggcg
ctcgcgctcggccgttatgaactgttgctgctcgccgaactggggttcggcctcgaagac
aagccccgcgcggcatcgagtccctccatggccgaaatgctcgacttcctgtcggtcacc
gggcatttcatcgaccgcgaccttctcgacgggcgcaatcgtgccttggcgggcgtaagg
caaagattgatcgaccggctgggtagggtggttgcctga
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