Sphingopyxis alaskensis: Sala_1106
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Entry
Sala_1106 CDS
T00361
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sal
Sphingopyxis alaskensis
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sal02000
]
Sala_1106
Transporters [BR:
sal02000
]
Other transporters
Pores ion channels [TC:
1
]
Sala_1106
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
ABF52823
UniProt:
Q1GU49
LinkDB
All DBs
Position
complement(1137522..1140011)
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AA seq
829 aa
AA seq
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METRLGFVAAAMVLCLPVPAKAAEERAFDVRGGSLSAVVPVISRQGGVSISVADARLWKA
RVRSVRGRMPVDEAIRRLLAGTDAHAVRVSATSWRIERRPAPQRSRAAPAPRQVPQPRAR
EPANEVVAAAADTIIVTASKTDLPYSHFAGVVTQLDGGELAFGGERGMDSILSRTATVSS
THLGSGRNKLFIRGIADSSFTGPTQATVGQYLGDIRLSYNAPDPDLRLYDIDNVEILEGP
QGTLYGAGSLGGIIRVIPKAPDPRGPTVQAIAGASLTRHGDPGGDIAGIANLPVGEDGHA
LRLVGYMITDGGYIDNPLRGQNDVNRVHIRGGRGTLRLDAGDGWTVDIGGIYQSNTSDDA
QYADKDAPPLTRRSMIEQPAKARYGLGTLVVMKDWGDLRFQSSNAFIDHRLFERFDASLP
VAGELDGSGSGNAVGTVDVERLFAPIDITPSRDVPRRLEQHNATRMFASENRLWRPYHDG
FGWVAGASFITNRARQEREYAYGPLHTPLPGVTNRITEWTGYAEATKELLTGLVASGGLR
LSHVRLGGMAEDVPFALAQAGRATTASRHETDLLPSASLLAMPLDNLRLYARYQEGFRPG
GLAVDGNFVRRFRNDRVQTWEAGVRFGDRKQTLLDATLSLSHSRWRNIQADFIDSNGFPT
TANIGDGRITSLSGALAMRPTDALTLELGAVYNHSRVDDLSPEILPVFAATPARLGRIPN
VASHAVRGSVNYATMIGDEDFRINGWANYIGPSRLGIGPVLGESQGDYIDTGLAMRVGND
RRGLSLTLTNLFDSRGNRFSLGTPFVEGNAGFLTPLRPRTLRIAVDVAY
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcgccttggctttgtcgcagcagcgatggtgctttgcctgccggtgccggcg
aaggcggccgaggaacgcgccttcgacgtgcgcggcggcagcctgtcggccgtggtgccg
gtcatcagccggcaaggcggcgtcagcatcagcgtcgccgacgcccggttatggaaagcg
cgggtccggtcggtgcgcggacggatgcccgtcgacgaagcgatccgccgcctgcttgcg
gggaccgacgcacatgccgttcgggtcagtgcgacgagctggcgcatcgaacggcgcccg
gcgccgcagcgtagccgcgccgctcccgctccgcggcaagtgccccagccccgcgcacgt
gaacccgcgaacgaggtggttgccgccgcggccgatacgatcatcgtcaccgcgtcgaag
accgaccttccttactcgcatttcgccggcgtcgtcacccaattggatggcggcgaactg
gcgtttggcggggaacgcgggatggactcgatcctgtcgcgcaccgccacggtctcctcg
acccatctgggttcgggacgcaacaagctgttcatccgcggcatcgccgattcgagtttc
accggcccgacgcaggcaacggtcggccagtatctgggcgacatcaggctgagttacaac
gccccggaccccgacctgcgtctctatgacatcgacaatgtcgaaatcctcgaaggaccg
cagggcacgctttacggcgcagggtcgctcggcgggatcattcgcgtcattccgaaagcc
cccgatccgcgcggcccgaccgtacaggcgatcgcgggcgcctcgctgacccggcatggc
gaccccggcggcgacatcgccggcattgcgaacctgcccgtcggcgaggacggccatgcg
ttgcgcctcgtcggttacatgatcaccgatggcggctatatcgacaatccactccgcgga
cagaatgacgtcaatcgcgtgcatatccggggcggccgcggcactcttcggctcgatgcg
ggagacggctggaccgtcgatatcggcggcatctatcaatcgaacacctccgacgatgcc
caatatgccgacaaggatgcaccgccgctcacccgccgctcgatgatcgagcaaccggcg
aaggcgcgctacggtctcggcacgctcgtcgtgatgaaggattggggcgatttgcgcttt
caatcgtcgaacgcctttatcgaccaccggctgttcgaacgcttcgacgccagcctgccg
gtcgcgggcgaactggacggctccgggtcgggcaacgccgtcgggaccgtcgacgtcgaa
cgcctcttcgcgccgatcgacatcacgccgtcgcgcgacgtgccgcgtcggctcgaacag
cataatgcgacgcggatgttcgccagcgaaaaccggctgtggcgtccctatcacgacggg
tttggctgggtcgccggggcaagcttcatcaccaatcgcgcgcgacaggaacgcgaatat
gcctatgggccgctccataccccgctgcccggcgtgaccaaccggatcaccgagtggacg
ggctatgccgaggcgaccaaggaactgctgacgggtcttgtcgcctccggcgggctgcgg
ctgtcgcacgtgcggcttggcggcatggccgaggatgtgccgttcgcgcttgcccaggcg
gggcgagcgacgacggcatcgcggcacgagaccgacctcttgccctccgcctcgctgctt
gcgatgccgctcgacaatctgcggctctacgcccgctatcaggagggatttcgccccggc
gggcttgccgtcgacggcaattttgtgcggcgtttcagaaacgatcgcgtccagacgtgg
gaagcgggggtgcgcttcggcgaccgaaagcagacgctgctcgacgcgaccttatctttg
tcgcacagccgctggcgcaacatccaggccgacttcatcgacagcaacggctttccgacc
accgccaacatcggcgacggccgcatcaccagcctgtcgggcgcgctcgcgatgcggccg
accgacgcgctgacccttgaactgggcgcggtctacaaccacagccgcgtcgatgatttg
tcgccggagatcctgcccgttttcgccgcgacccctgcgcggctggggcgcattcccaat
gtcgcaagccatgccgtgcgcggatcggtcaactatgcgacgatgatcggcgatgaggat
tttcgtattaacggatgggccaactatattggcccatcccggcttggcatcggcccggtg
ctgggcgaaagccagggcgattatatcgatacagggcttgcgatgcgtgtcggcaacgac
cgccgcggcctgtcgctgacgctcaccaacctgttcgattcgcggggaaatcgcttctcg
ctcggcacacccttcgtcgagggtaatgcgggtttcctgaccccgctccgcccccgcacg
ctgcgcatcgccgtcgacgtcgcttattag
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