Sphingopyxis alaskensis: Sala_1806
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Entry
Sala_1806 CDS
T00361
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sal
Sphingopyxis alaskensis
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sal03400
]
Sala_1806
DNA repair and recombination proteins [BR:
sal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sala_1806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_30
AAA_16
AAA_22
Lon_C
AAA_5
AAA
SLFN-g3_helicase
RecA
AAA_24
nSTAND3
NTPase_1
CobU
AAA_14
ATPase_2
Glyco_hydro2_C5
DUF7125
AAA_29
CbiA
Zn_ribbon_6
ABC_tran
Ribosomal_L37e
Motif
Other DBs
NCBI-ProteinID:
ABF53518
UniProt:
Q1GS54
LinkDB
All DBs
Position
complement(1901348..1902709)
Genome browser
AA seq
453 aa
AA seq
DB search
MAKAKRQYVCQNCGSATYRWQGQCADCGEWNTLVEEAAETVFSAKHNLSKGGRTIPLETL
NAESRMPERMLCGIAEFDRALGGGFVAGSATLIGGDPGIGKSTLLLQAAGRLAKAGRSVV
YISGEEAAAQVRLRAQRLGLGDAPVALASATSVRDILATLGSRTADFVVIDSIQTMHSDL
IDSAPGTVSQVRASAQELIRYAKDSGAAIVLVGHVTKDGTIAGPRVLEHMVDTVLAFEGE
RSHQYRILRAVKNRFGGTDEIGVFAMGEEGLGEVSNPSSLFLTDRSRDVPGSVVFPALEG
TRPVLVEVQALTVRLASGATPRRAVVGWDSGRLAMVLAVLEARCGLQMGAAEVYLNIAGG
YRLTDPAADLAVATALVSAFSERPVPPDAIVFGELSLSGEVRPVSHDALRLREAAKLGFS
TAWGPNGMKRVNGIGVTGFARLGELVDLMLGRD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcgaaacgtcaatatgtctgccagaattgcggctccgccacctatcgctgg
caggggcagtgcgccgactgcggcgagtggaacacgctggtcgaggaggccgccgaaacc
gtcttttcggccaagcacaacctgagcaaaggcggacggacgatcccgctcgaaacgctg
aatgccgaaagcaggatgcccgagcggatgctgtgcggcatcgccgagttcgaccgcgca
ctgggcggcggcttcgtcgcggggtcggcgaccttgatcggcggcgatccggggatcggc
aaatcgaccttgctgttgcaggccgcgggacggctcgccaaggcgggcaggtcggtcgtc
tatatcagcggcgaggaggcggcggcgcaggtgcgattgcgcgcgcagcggctggggctc
ggcgacgcgccggtcgcactcgccagcgcgacatcggtgcgcgacatccttgcgacgctc
ggcagccggaccgccgatttcgtcgtgatcgattcgatccagacgatgcacagcgacctg
atcgacagcgcgccggggacggtgagccaggtccgcgcgagcgcgcaggagctgatccgc
tatgccaaggacagcggcgcggcgatcgtgctggtcgggcatgtcaccaaggacggcacg
atcgccgggccgcgcgtgctcgaacatatggtcgacacggtgctggcgttcgagggtgag
cgcagccatcaatatcgcatcctgcgcgcggtcaagaaccgctttggcggcaccgacgag
atcggcgtgttcgcgatgggcgaggaagggctgggcgaggtatcgaacccgtcgagcctg
ttcctgaccgaccgcagccgcgacgtgccgggatcggtggtgttccccgcgctggaaggc
acgcggccggtgctcgtcgaggtgcaggcgctgaccgtgcgcctcgcgagcggcgcaacg
ccgcggcgggccgttgtcggatgggacagcgggcggctcgcgatggtgctcgcggtgctg
gaggcgcgctgcgggctgcaaatgggcgcggccgaagtctatctcaatatcgccggcgga
taccggctgaccgatcccgccgccgaccttgcggttgccacggcgctggtttcggcgttc
agcgagcggccggtgccccccgatgcgatcgtcttcggcgaactgtcgctgtcgggcgaa
gtgcgcccggtatcgcacgatgcgctacgtttgcgcgaagcagcaaagctcggtttttca
acggcctggggtccaaatggcatgaagcgcgtgaacggcatcggcgtcaccggctttgcc
cggctcggcgaactcgttgacctgatgctcggtcgcgactag
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