Sphingopyxis alaskensis: Sala_1988
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Entry
Sala_1988 CDS
T00361
Name
(GenBank) OmpA/MotB
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sal
Sphingopyxis alaskensis
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sal02000
]
Sala_1988
Transporters [BR:
sal02000
]
Other transporters
Pores ion channels [TC:
1
]
Sala_1988
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Ortholog
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GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Surface_Ag_2
OmpA_membrane
Motif
Other DBs
NCBI-ProteinID:
ABF53699
UniProt:
Q1GRM3
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All DBs
Position
complement(2096682..2097803)
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AA seq
373 aa
AA seq
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MRKLAVAVALASTTLASPSMARDDSWYVGVGAGAMLVEDIDLDIGTFNNAGSLDHRAGYD
FEGTVGYDFGGFRAEVEVGFREADIKSGRFGNPGIPQTASGAGTLFTGSTDLNGDSNALS
FMVNGMLDFGDDDGLQGFVGGGAGVARVSVEPVFAGPFLDDSDTGFAWQAIAGVRAPLSS
NWDVGLKYRFFNADNVDLVDQAGRDVSTRFRSHSILGTLTYNFGGAPEPVAPPPPPPPPP
PPPPPPPPPPPPPVVECAPGPYIVYFDWDQSNITPEAASTLDNAISAYNRGCTGTQIMLA
GHADRSGSARYNVGLSERRNDAVRSYLTARGISDGSISAQAFGETRPAVATADGVRNDQN
RRVEITYGPNSGM
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcttgccgtcgctgtggcgttggcctccaccaccctcgcgtcgccgtccatg
gcgcgcgacgattcctggtatgtcggtgttggcgcgggcgcaatgctcgtcgaagacatt
gatctcgatatcggcaccttcaacaatgccgggtcgctcgaccatcgcgcgggctatgat
ttcgaaggcaccgtcggttatgacttcggcgggttccgtgccgaagtcgaagtcggcttc
cgtgaagccgacatcaagtcgggccgtttcggcaaccccggcatcccgcagacggcatcg
ggcgcgggtacgctgttcaccggctcgaccgacctgaacggcgattcgaacgcgctcagc
ttcatggtcaacggcatgctcgacttcggcgacgacgacggcctgcagggctttgtcggc
ggtggcgccggtgtcgcccgcgtgtcggtcgaacccgtctttgccggtccgttcctcgac
gattcggacacgggctttgcctggcaggcgatcgcgggcgtccgcgcgccgctcagcagc
aactgggacgtcggcctgaagtatcgcttcttcaacgccgacaatgtcgatctggtggat
caggccggtcgcgacgtttcgacgcgcttccgctcgcactcgatcctcggcacgctgacg
tacaacttcggcggcgctccggagccggtggcgcctccgccgccgcctccgccgcccccg
ccgcccccgccgcccccgccgcctccgccgccgccgccggtcgtggaatgcgcgcctggg
ccgtacatcgtgtatttcgactgggatcagtcgaacatcacgccggaagcggcttcgacg
ctcgacaatgcgatcagcgcctataaccgtggttgcacgggcacgcagatcatgctcgcc
ggtcacgccgaccgttcgggttcggcccgctacaacgtcggcctgtcggaacgccgcaac
gatgcggttcgcagctatctgaccgctcgcggtatctcggatggttcgatcagcgcgcag
gcgttcggcgaaacccgtccggccgttgcgaccgccgacggcgtccgcaacgaccagaac
cgtcgcgtggaaatcacttacggtccgaactcgggcatgtaa
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