Sphingopyxis alaskensis: Sala_2079
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Entry
Sala_2079 CDS
T00361
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sal
Sphingopyxis alaskensis
Pathway
sal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sala_2079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sal03019
]
Sala_2079
03110 Chaperones and folding catalysts [BR:
sal03110
]
Sala_2079
03029 Mitochondrial biogenesis [BR:
sal03029
]
Sala_2079
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sal04147
]
Sala_2079
Enzymes [BR:
sal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Sala_2079
Messenger RNA biogenesis [BR:
sal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Sala_2079
Chaperones and folding catalysts [BR:
sal03110
]
Heat shock proteins
HSP60 / Chaperonin
Sala_2079
Mitochondrial biogenesis [BR:
sal03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Sala_2079
Exosome [BR:
sal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Sala_2079
Exosomal proteins of other body fluids (saliva and urine)
Sala_2079
Exosomal proteins of breast cancer cells
Sala_2079
Exosomal proteins of colorectal cancer cells
Sala_2079
Exosomal proteins of bladder cancer cells
Sala_2079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SHOCT-like_DUF2089-C
EAD9
Motif
Other DBs
NCBI-ProteinID:
ABF53788
UniProt:
Q1GRD4
LinkDB
All DBs
Position
2183461..2185080
Genome browser
AA seq
539 aa
AA seq
DB search
MAAKEVKFASDARDRMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELADKFENMGAQMLREVASKQNDKAGDGTTTATVLAQAIVREGSKAVAAGMNPMDVKRGI
DLAVKAVVKDLETHAKKVSANSEIAQVATISANGDEEVGRILAEAMDKVGNEGVITVEEA
KSLATELETVEGMQFDRGYLSPYFITNAEKLKVELDDPYILIHEKKLSNLQAMLPLLEAV
VQSGKPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGNV
VSEDLGIKLENVTVNMLGRAKKVVIDKDNTTIVDGVGARTDIDARIAQIRQQIDTTTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGIALL
RALKALDGLKAANDDQQSGIDIVRRALRAPARQIADNAGEDGAWIVGKLLESSDYNWGFN
AATGEYEDLVKAGVIDPAKVVRTALQDAASVAALLITTEALVAELPKEEKAAPMPAMDF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagtgaaatttgcgtcggacgcgcgtgatcgcatgctgcgcggcgtg
gatacgcttgcgaatgcagtgaaggtcacgctcggccccaagggtcgcaacgtggttatc
gaaaagagtttcggcgcgccgcgcatcaccaaggacggcgtcactgtcgccaaggagatc
gaactcgccgacaagttcgagaacatgggtgcgcagatgctgcgcgaggtcgcctcgaaa
cagaatgacaaggccggcgacggcaccaccaccgcaaccgtgcttgcgcaggcgatcgtc
cgcgagggatcgaaagcggtggccgcgggcatgaacccgatggacgtgaagcgcggcatc
gacctcgccgtgaaggccgtggtgaaggatctcgaaacccatgccaagaaggtcagcgcc
aacagcgaaatcgcccaggtcgcaaccatctcggcgaacggcgacgaggaggtgggccgc
atcctcgccgaagcgatggacaaggtcggcaacgaaggcgtcatcaccgtcgaggaggcg
aagagcctggcgaccgaactcgaaacggtcgaaggcatgcagttcgaccgcggctatctg
tcgccctatttcatcaccaatgccgaaaagctgaaggtcgaactcgacgacccctatatc
ctgatccacgaaaagaagctttcgaacctgcaggcgatgctgccgctgctggaagcggtc
gtgcagtcgggcaagccgctgctcatcatcgccgaagatgtcgagggcgaggcattggca
acgctggtcgtcaaccgcctgcgcggcgggctcaaggtcgccgcggtcaaggcgccgggc
tttggcgaccgtcgcaaggcgatgctggaagatatcgcgatcctcaccggcggcaatgtc
gtgagcgaagacctgggcatcaagctggagaatgtcacggtcaacatgctcgggcgcgcc
aagaaggtcgtgatcgacaaggataatacgacgatcgtcgacggcgtcggcgccaggacc
gacatcgacgcacgcatcgcccagattcgccagcagatcgacacgacgaccagcgactat
gaccgcgagaagctgcaggaacgcctcgccaagctcgcgggtggcgttgcggtgatccgc
gtcggcggcgcaaccgaggtcgaagtcaaggagcgcaaggatcgcgtcgacgacgcgctt
cacgcgacgcgtgctgcggtggaagaaggcattcttcccggcggcggcattgcactgctc
cgcgcgctcaaggcgctcgacggcctcaaggcggcgaacgacgatcagcagtccggcatc
gacatcgtccgccgcgcgctccgcgctccggcgcgccagatcgccgacaacgcgggcgag
gatggtgcgtggatcgtcggcaaactgctcgaaagcagcgactataactggggcttcaat
gctgccaccggcgaatatgaagacctcgtcaaagcgggtgtgatcgacccggcgaaggtc
gtccgcacggcgctgcaggacgcggcctcagtcgccgcgctgctgatcacgaccgaggca
ctcgtcgccgagctgccgaaggaagagaaagccgcgccgatgccggcgatggacttctga
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integrated database retrieval system
