Sphingopyxis alaskensis: Sala_2102
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Entry
Sala_2102 CDS
T00361
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
sal
Sphingopyxis alaskensis
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sal03009
]
Sala_2102
Enzymes [BR:
sal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Sala_2102
Ribosome biogenesis [BR:
sal03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sala_2102
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ABF53811
UniProt:
Q1GRB1
LinkDB
All DBs
Position
2209342..2210559
Genome browser
AA seq
405 aa
AA seq
DB search
MNARKTPLDDAVIGEEDDGIRLDRWFKRHRPGTPHALLARWARSGQLTLDGRKADVSDRI
AVGQRLVMPVPPVEAEARPARKDRPLTEADVALAESMLIHRDASAIVLNKLPGLATQGGT
KTEHHVDGLLDALKYDAPVRPKLVHRLDKDTSGALLIARTPRAAAWFAKSFSNRSAKKTY
WAIVVGVPDIAQGEIDLPLAKQPGSGGEKMHVHDSGLASKTRYRVIDRAGNSAAWVELQP
LTGRTHQLRVHMAAIGHPIVGDGKYGGKGAFLTGTISRKLHLHSRRLRIDHPDGGVIDVS
ADVPDHFAASLDALGFDPLLGEVEIDDDARGPPPKASAKAAAKAYAKQIRKARRGERRGR
TATSKPTDHVGKAKPKAKAKIAKPTGRKPAAKKPSAHPTRPRSHS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcgcaagacgccgctcgacgacgcggtcataggcgaagaggacgacggcatt
cgcctcgaccgctggttcaagcgccaccggccggggacgccgcacgcgctgctcgcgcgc
tgggcacggtcggggcaactgacgctcgacggcaggaaggccgatgtgtccgaccggatc
gcggtgggacagaggctcgtcatgcctgtgccgccggtcgaagccgaggcgcgaccggcg
cgcaaggaccgtccgctgaccgaagccgacgtcgcactcgccgaatcgatgctgatccac
cgcgacgcgagcgccatcgttctcaacaagctgcccggcctcgcgacgcagggggggacg
aagaccgagcatcatgtcgacggactgcttgacgcgctgaaatatgacgcgccggtgcgc
cccaagctggtccaccggctcgacaaggatacgtccggcgcgctgctgatcgcgcgcacc
ccgcgcgccgcggcctggttcgccaagagcttttcgaaccgcagcgcgaagaaaacctat
tgggcgatcgtcgtcggcgtgcccgacatcgcgcagggcgagattgacctgccgctcgcc
aaacagccggggtcggggggcgaaaagatgcacgttcacgacagcggccttgcctcgaaa
acgcgctatcgcgtgatcgaccgcgcggggaacagtgcggcgtgggtggagctgcaaccg
ctgacgggccgtacgcaccagttgcgcgtccatatggcagcgatcggccatccgatcgtc
ggtgacggcaaatatggcggcaagggcgccttcctgaccgggacgatcagccgcaagcta
cacctgcacagccggcggctgcgcatcgaccatcccgacggcggcgtgatcgacgtgagc
gccgacgtgcccgaccatttcgccgcgagcctcgacgcgctcggcttcgacccgctcctc
ggcgaggtcgagatcgatgacgacgccaggggaccgccgccgaaagcttcggcaaaagcc
gctgccaaggcgtatgccaagcagatccgcaaggcacggcgcggcgaacgccgcgggcgc
accgcaaccagcaagccgaccgaccatgtcggcaaggccaaacccaaggccaaggcgaaa
atcgccaagccgacgggacgcaagcccgccgcgaaaaagccgtcggcgcaccccacgcga
ccgcgctcgcacagttga
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