Sphingopyxis alaskensis: Sala_2110
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Entry
Sala_2110 CDS
T00361
Name
(GenBank) Polynucleotide adenylyltransferase region
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sal
Sphingopyxis alaskensis
Pathway
sal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sala_2110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sal03019
]
Sala_2110
Enzymes [BR:
sal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Sala_2110
Messenger RNA biogenesis [BR:
sal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Sala_2110
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SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ABF53819
UniProt:
Q1GRA3
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All DBs
Position
complement(2218445..2219641)
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AA seq
398 aa
AA seq
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MTRLPDAAWRDRPGLRRIVAALADDGGAVKVVGGAVRDTLLGLDVTDVDLATPLVPGEVT
RRLEAAGIKVIPTGIAHGTVTAIASGDHHEITTLRRDVATDGRRATVAFADDWREDAARR
DFTINALYADPRTGAIDDWFGGLADLDRGRVAFIGDAASRIAEDHLRILRFYRFAARFGR
GDLDPASHAAVVAARQSLKSLSRERIADELAKILALPDPRAIVAQMHADGILAVLLPELD
AGFAAALDRLFANEAVAGAVPAALRRLAALLPADVAIAEQVASRLRLSTRQRKHLAALGG
HRHDVARPVRQLAYAIGIEAARDVHLLAGDPAALRTLSDWQVPMLPVKGGDIVARGIAAG
PEVARILKAVEAAWVAEDFPDAARVAELVDQKIGRVSD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcggctgcccgacgccgcctggcgcgaccggccggggctgcgccgcatcgtcgcc
gcgcttgccgacgatggcggcgcggtcaaggtcgtcggtggcgcggtgcgcgacaccttg
ctcggccttgatgtcaccgacgtcgaccttgcgaccccgcttgtccccggagaggtgacg
cggcggctggaagcggcgggaatcaaggtgatcccgaccggaatcgcgcacggcaccgtc
accgcgatcgccagcggcgaccatcacgagatcacgacgcttcgccgcgacgtcgcgacc
gacggccgccgtgcgacagtggccttcgccgacgactggcgcgaggatgcggcgcgccgc
gacttcacgatcaacgcgctttatgccgatccccggacgggcgcgatcgacgactggttc
gggggccttgcggatcttgaccgcggccgcgtcgcgttcatcggcgacgccgcctcgcgc
attgccgaggatcatctgcgcatcctgcgcttttaccgcttcgccgcgcgcttcgggcgt
ggcgacctcgatcccgcaagccatgccgcggttgtcgcggcgcggcaatcgctcaaaagc
ctgtcgcgcgaacgcatcgccgacgaactcgccaagatattggcgctgcccgacccgcgc
gcgatcgtcgcgcagatgcacgccgacggcatcctcgccgtgctgctgcccgaactcgac
gccggctttgcggcggcgctcgaccggctgttcgcaaacgaagcggtggccggtgctgtg
cccgcggcgcttcgccgcctcgccgcgctgctccccgccgatgtcgcgatcgccgaacag
gtggcgagccgcctgcgcctgtcgacacgccagcgcaagcatctcgccgcgctcggcggc
caccgccacgatgtcgcgcgtccggtgcgccagctggcgtacgccatcgggatcgaggcg
gcgcgcgacgtgcatctgctggcgggcgatcctgccgcgcttcggacgctgtcggactgg
caggtccccatgctcccggtgaagggcggggacatcgtcgcgcgcggcattgcggcgggg
cctgaggtggcgcgcatcctgaaggcggtcgaggccgcgtgggtggccgaagatttcccg
gacgccgcgcgcgtcgccgagctggtcgatcagaagatcggccgcgtcagcgactga
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