Sphingopyxis alaskensis: Sala_2328
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Entry
Sala_2328 CDS
T00361
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sal
Sphingopyxis alaskensis
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sal02000
]
Sala_2328
Transporters [BR:
sal02000
]
Other transporters
Pores ion channels [TC:
1
]
Sala_2328
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF2490
Motif
Other DBs
NCBI-ProteinID:
ABF54037
UniProt:
Q1GQN5
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Position
2455375..2457735
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AA seq
786 aa
AA seq
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MNARASLLAGLSSLALVATPATAQDAAAEDDGNIIIVTATKRDANLQDIPFSINAQTAED
IQKSGAVTLEDLSRNVAGLSVQNLGPGQSQVSVRGVSAGQVVRDQPGVKEQVGVYLDESV
ISLSLFTPDIDLYDLNRVETLRGPQGTLFGSGSVGGTIRYITNQPKIGVMEGSVEANLNL
VDGDDIGGHLKGAVNVPMGDNAALRAVGYYTRYGGFINAIGPAGKEDVNSGERYGGRIAL
TFEPSDSLSITPRIVYQKVTADGFNRQEIYNLYANQFTTTRPAVTFDEREQYLLLREAFE
DETLIADLKIDVGLGGATLTSVTSYINRDILVSRDASALTGSVSVDLGFPDAGVLLPSNL
LDTTDLETWTQEVRVASDNDGPFQWLVGGFYSKIDRVYAQRLPTPGYDAVTDATLGAGTS
AGARNGFGPDSPYNADLPYDIKQFAIFGEISYDLNDALTATAGGRYYDFKETRSFVSGGL
FANGDNRTDSTKSSGFTPRFLLSYDVSDNVTVNAQASKGFRLGGVNDPLNLPLCSPQDAA
LFGAFQDYDDETLWNYELGVKTQGRGFTFNAAGFYNDIKNLQVTLDAGTCSSRIVFNVPK
AHSMGVEFELGLSPADGLDLNLSGSLIEAEFDSTLPGALTVATGIRDGNRLPSVPKFQLT
ASGSYEWPIGDRANMYVAASFQHVGTRYTQPADQENNPRTFVHNLPFGGAPAGASTTVDL
QLPDYQLVNLSAGVDFDNGLSLIAYVNNVFDENALLSFDRERGGRARLGYTVGQPRTFGI
TARKTF
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacgggcatcattgctcgcgggcctgtcttcgcttgcgcttgtcgcgaccccg
gccacggcgcaggacgccgctgccgaggatgacggcaacatcatcatcgtcaccgcgacg
aagcgcgacgccaatcttcaggacattcccttttcgatcaacgcgcaaaccgccgaggac
atccagaaatcgggcgcggtgacgctcgaggatctgtcgcgcaacgtcgcgggactgtcg
gtccagaacctcgggccggggcagagccaggtgtcggtgcgcggcgtgtccgccgggcag
gtcgtgcgcgaccagccgggggtcaaggaacaggtcggcgtctatctcgacgaaagcgtg
atttcgctctcgctcttcacccccgacatcgatctttacgacctcaaccgcgtcgaaacg
ctgcgcgggccgcagggcacgctcttcggctcgggctcggtcggcgggacgatccgctac
atcaccaaccagccgaagatcggcgtgatggagggcagcgtcgaggcgaatctcaacctc
gtcgacggtgacgacatcggcggccatctgaagggcgcggtcaatgtgccgatgggcgac
aatgcggcgctgcgcgcggtcggctattacacacgctacggcggcttcatcaacgcgatc
ggtccggcgggcaaggaggatgtcaacagcggcgaacgctacggtggacgcatcgcgctc
accttcgagcccagcgacagcctctcgatcaccccgcgcatcgtctatcagaaggtcacg
gccgacggcttcaaccggcaggaaatctacaacctctacgccaaccagttcaccacgacg
cgccccgcggtgacctttgacgagcgcgagcaatatctgctgctgcgcgaggcgttcgag
gatgaaacgctgatcgccgacctcaagatcgacgtcgggctgggcggcgcgacgctgacc
tcggtaacgagctatatcaaccgcgacatcctcgtcagccgtgacgcgagcgcgctcacc
ggatcggtatcggtcgaccttgggttccccgacgcgggcgtgctgctgccgtcgaacctg
ctcgacaccaccgacctcgaaacctggacacaggaggtccgcgttgcgtcggacaatgac
gggccgttccagtggctcgtcggcggcttctattccaagatcgaccgcgtctatgcccag
cggctgccgacgccgggctatgatgccgtcaccgatgcgacgcttggagccggaacctcg
gcgggcgcgcgcaacggcttcggccccgattcgccatataacgccgacctgccctatgac
atcaagcagttcgcgatcttcggtgagatcagctatgatttgaacgacgcccttaccgcg
acggcgggcgggcgctattatgacttcaaggaaacgcgcagcttcgtctccggcggcctc
tttgccaacggagacaaccgcaccgacagcaccaagtcgagcggcttcaccccgcgtttc
ctgctgtcctacgacgtcagcgacaatgtcacggtgaatgcccaggcgtcgaagggcttt
cgcctcggcggggtcaacgatcccttgaacctgcccctctgctcgccgcaggacgcagcc
ttgttcggcgcgtttcaggattatgacgatgaaacattgtggaactacgaactcggcgtg
aagacgcaggggcgcggtttcaccttcaacgccgcgggcttttacaacgacatcaagaat
ctccaggtcacgctcgacgccggcacctgttcgtcgcgcatcgtcttcaacgtgcccaag
gcgcattcgatgggcgtggagttcgaactggggctgtcgcccgccgacgggctcgacctc
aacctgtcgggcagcctcatcgaggccgagttcgactcgacgctgccgggcgcactcacg
gtcgcgacgggtatccgcgacggcaaccgcctgccgtcggtgccgaagttccagctgacg
gcatcgggcagttatgaatggccgatcggtgaccgcgcgaacatgtatgtcgcggcatcc
ttccagcatgtcggcacgcgctacacccagccggcggaccaggaaaacaacccgcgcacc
ttcgtccacaacctgcccttcggcggcgccccggccggggcatcgacgacggtcgacctg
caactgcccgactatcaactcgtcaatctgagcgcgggcgtcgatttcgacaacggcctg
tcgctgatcgcctatgtcaacaatgtcttcgacgaaaacgccctgctctcgttcgaccgc
gaacgcggcggccgcgcgcggcttggctacactgtcggccagccgcgcacctttggcatc
accgcgcgcaagacattctga
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